RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 ARFGEF2Q9Y6D5 1785 aa11.91□□□□□ -0.5
HERC1-206ENST00000559996 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 A0A087WZG4 1122 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 RGL2O15211 777 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 PHF14O94880 888 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 CWF19L2Q2TBE0 894 aaKnown RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 MYD88Q99836 296 aa11.9□□□□□ -0.5
HERC1-206ENST00000559996 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 IBTKQ9P2D0 1353 aaPredicted RBP11.9□□□□□ -0.5
HERC1-206ENST00000559996 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 NEURL1BA8MQ27 555 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 MS4A1P11836 297 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 GYS1P13807 737 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 CASP7P55210 303 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
HERC1-206ENST00000559996 UTYO14607 1347 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
HERC1-206ENST00000559996 ALDH1L1O75891 902 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 TM4SF1P30408 202 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
HERC1-206ENST00000559996 FKBP8Q14318 412 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 GCKRQ14397 625 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 QSER1Q2KHR3 1735 aa11.88□□□□□ -0.51
HERC1-206ENST00000559996 H7C1W4 665 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
HERC1-206ENST00000559996 RFC4P35249 363 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
HERC1-206ENST00000559996 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
HERC1-206ENST00000559996 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 ARXQ96QS3 562 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 MEIS3Q99687 375 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
HERC1-206ENST00000559996 SUSD4Q5VX71 490 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
HERC1-206ENST00000559996 ZPR1O75312 459 aa11.85□□□□□ -0.51
HERC1-206ENST00000559996 GPTP24298 496 aa11.85□□□□□ -0.51
HERC1-206ENST00000559996 NFIXQ14938 502 aa11.85□□□□□ -0.51
HERC1-206ENST00000559996 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
HERC1-206ENST00000559996 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
HERC1-206ENST00000559996 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
HERC1-206ENST00000559996 NTSR2O95665 410 aa11.84□□□□□ -0.51
HERC1-206ENST00000559996 NEXNQ0ZGT2 675 aa11.84□□□□□ -0.51
HERC1-206ENST00000559996 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
HERC1-206ENST00000559996 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
HERC1-206ENST00000559996 NIP7Q9Y221 180 aaKnown RBP eCLIP11.84□□□□□ -0.51
HERC1-206ENST00000559996 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
HERC1-206ENST00000559996 GRM8O00222 908 aa11.83□□□□□ -0.52
HERC1-206ENST00000559996 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
HERC1-206ENST00000559996 DDR1Q08345 913 aa11.83□□□□□ -0.52
HERC1-206ENST00000559996 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
HERC1-206ENST00000559996 SIRT2Q8IXJ6 389 aa11.83□□□□□ -0.52
HERC1-206ENST00000559996 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
HERC1-206ENST00000559996 SUCLG2Q96I99 432 aa11.83□□□□□ -0.52
HERC1-206ENST00000559996 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
HERC1-206ENST00000559996 AFDNP55196 1824 aaKnown RBP11.82□□□□□ -0.52
HERC1-206ENST00000559996 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
HERC1-206ENST00000559996 FOXO4P98177 505 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 ERICH6BQ5W0A0 696 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
HERC1-206ENST00000559996 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 GNAI3P08754 354 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 SLC10A5Q5PT55 438 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 PLA2G12BQ9BX93 195 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 CASZ1Q86V15 1759 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
HERC1-206ENST00000559996 AAMPQ13685 434 aa11.8□□□□□ -0.52
HERC1-206ENST00000559996 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
HERC1-206ENST00000559996 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
HERC1-206ENST00000559996 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
HERC1-206ENST00000559996 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
HERC1-206ENST00000559996 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
HERC1-206ENST00000559996 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
HERC1-206ENST00000559996 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
HERC1-206ENST00000559996 TRMT112Q9UI30 125 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms