RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 EPB41L2O43491 1005 aaKnown RBP17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 TRIM37O94972 964 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 ANAPC15P60006 121 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 COPS6Q7L5N1 327 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 NEURL1BA8MQ27 555 aa17.61■□□□□ 0.41
RABGGTA-212ENST00000559974 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
RABGGTA-212ENST00000559974 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
RABGGTA-212ENST00000559974 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
RABGGTA-212ENST00000559974 USP16Q9Y5T5 823 aa17.61■□□□□ 0.41
RABGGTA-212ENST00000559974 TRAK2O60296 914 aa17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 PA2G4Q9UQ80 394 aaKnown RBP17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 KCNQ4P56696 695 aa17.6■□□□□ 0.41
RABGGTA-212ENST00000559974 GCKRQ14397 625 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 MYD88Q99836 296 aa17.59■□□□□ 0.41
RABGGTA-212ENST00000559974 GPATCH3Q96I76 525 aa17.58■□□□□ 0.4
RABGGTA-212ENST00000559974 IL25Q9H293 177 aa17.58■□□□□ 0.4
RABGGTA-212ENST00000559974 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
RABGGTA-212ENST00000559974 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
RABGGTA-212ENST00000559974 SSFA2P28290 1259 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 MCM2P49736 904 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 NEK4P51957 841 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 CWC22Q9HCG8 908 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 SGSM2O43147 1006 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 IFIT2P09913 472 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 PTMSP20962 102 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
RABGGTA-212ENST00000559974 PIP4K2AP48426 406 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-212ENST00000559974 NUCB2P80303 420 aa17.56■□□□□ 0.4
RABGGTA-212ENST00000559974 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
RABGGTA-212ENST00000559974 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
RABGGTA-212ENST00000559974 SASH1O94885 1247 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 HSPA4P34932 840 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 AACSQ86V21 672 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 RAD50Q92878 1312 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 TJP1Q07157 1748 aa17.55■□□□□ 0.4
RABGGTA-212ENST00000559974 COL15A1P39059 1388 aa17.54■□□□□ 0.4
RABGGTA-212ENST00000559974 PALLDQ8WX93 1383 aa17.54■□□□□ 0.4
RABGGTA-212ENST00000559974 CYP2E1P05181 493 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 ZGPATQ8N5A5 531 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 PLBD2Q8NHP8 589 aa17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 GZF1Q9H116 711 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 LY75O60449 1722 aa17.53■□□□□ 0.4
RABGGTA-212ENST00000559974 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-212ENST00000559974 EAF2Q96CJ1 260 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-212ENST00000559974 TMX3Q96JJ7 454 aa17.52■□□□□ 0.4
RABGGTA-212ENST00000559974 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-212ENST00000559974 DIAPH3Q9NSV4 1193 aa17.52■□□□□ 0.4
RABGGTA-212ENST00000559974 GOLGA6L22H0YM25 854 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 SIL1Q9H173 461 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 ITPK1Q13572 414 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 KIAA1211Q6ZU35 1233 aa17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-212ENST00000559974 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 NBPF14Q5TI25 921 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 UBE3BQ7Z3V4 1068 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 COPRSQ9NQ92 184 aa17.5■□□□□ 0.39
RABGGTA-212ENST00000559974 CUL4AQ13619 759 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 CCDC8Q9H0W5 538 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 A0A087WZG4 1122 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 LOC102724428A0A0B4J2F2 783 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 FSD2A1L4K1 749 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 APBA3O96018 575 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 SIK1P57059 783 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 PROM2Q8N271 834 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
RABGGTA-212ENST00000559974 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 GOLGA6L3A6NEY3 463 aa17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 PKP1Q13835 747 aa17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 SMIM5Q71RC9 77 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms