RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 ETAA1Q9NY74 926 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 PTPRTO14522 1441 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 PTPRCP08575 1304 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 EBAG9O00559 213 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 DHX16O60231 1041 aaKnown RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 SKILP12757 684 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 CYP2C19P33261 490 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 PIP4K2AP48426 406 aaPredicted RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 HDGFP51858 240 aaKnown RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 NAP1L1P55209 391 aaKnown RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 RWDD2BP57060 319 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 CRYMQ14894 314 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 ZSCAN26Q16670 478 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC158Q5M9N0 1113 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 MICALL1Q8N3F8 863 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 TCP11L2Q8N4U5 519 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC148Q8NFR7 591 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 RUBCNQ92622 972 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 CARD10Q9BWT7 1032 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 IQCGQ9H095 443 aaKnown RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 VCXQ9H320 206 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 ACTR5Q9H9F9 607 aaPredicted RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 HOMER3Q9NSC5 361 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 IMPACTQ9P2X3 320 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 ATP10BO94823 1461 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 PLA2R1Q13018 1463 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 ATXN2Q99700 1313 aaKnown RBP2.76□□□□□ -1.97
RGPD1-204ENST00000559485 SYCP2Q9BX26 1530 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 PTCH1Q13635 1447 aa2.76□□□□□ -1.97
RGPD1-204ENST00000559485 TULP2O00295 520 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CDKL5O76039 1030 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PSMA5P28066 241 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 LMAN1P49257 510 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC57Q2TAC2 916 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SWT1Q5T5J6 900 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 FAM200AQ8TCP9 573 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 NUP133Q8WUM0 1156 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 GOLGA1Q92805 767 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MPHOSPH6Q99547 160 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CRACR2AQ9BSW2 395 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PIK3R4Q99570 1358 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MAP3K5Q99683 1374 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 KIF5CO60282 957 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MX1P20591 662 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC152Q4G0S7 254 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TTC22Q5TAA0 569 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CACNA2D4Q7Z3S7 1137 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TEX11Q8IYF3 940 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 C10orf67Q8IYJ2 551 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ARHGAP18Q8N392 663 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 FAM71BQ8TC56 605 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 RTF1Q92541 710 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CDK5RAP3Q96JB5 506 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MOV10L1Q9BXT6 1211 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ARFGAP3Q9NP61 516 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SATB2Q9UPW6 733 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 KIF1BO60333 1816 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CREB3O43889 395 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 DIAPH1O60610 1272 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 FCHSD2O94868 740 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ADCY5O95622 1261 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 DESP17661 470 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SSFA2P28290 1259 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ACTN2P35609 894 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 PEX19P40855 299 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CCT4P50991 539 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CKAP4Q07065 602 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SMC1AQ14683 1233 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 LRRC23Q53EV4 343 aaPredicted RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC186Q7Z3E2 898 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC170Q8IYT3 715 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 IQUBQ8NA54 791 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 KLHL23Q8NBE8 558 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ARMC2Q8NEN0 867 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 NSRP1Q9H0G5 558 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 GNL3LQ9NVN8 582 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 TPX2Q9ULW0 747 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 NUB1Q9Y5A7 615 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 USH1CQ9Y6N9 552 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 INO80Q9ULG1 1556 aaPredicted RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MYOM1P52179 1685 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 INPP5BP32019 993 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 GBP1P32455 592 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SNW1Q13573 536 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 MSL1Q68DK7 614 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ATL3Q6DD88 541 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 FCHSD1Q86WN1 690 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 GPR161Q8N6U8 529 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 AFAP1L1Q8TED9 768 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SNRNP27Q8WVK2 155 aaKnown RBP2.75□□□□□ -1.97
RGPD1-204ENST00000559485 LMBRD1Q9NUN5 540 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 SMC3Q9UQE7 1217 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 CAMSAP1Q5T5Y3 1602 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 ARHGEF10O15013 1369 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 RGS12O14924 1447 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 NEXMIFQ5QGS0 1516 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 LMTK2Q8IWU2 1503 aa2.75□□□□□ -1.97
RGPD1-204ENST00000559485 LOC102724159A0A0B4J2E5 919 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms