RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 RUNDC1Q96C34 613 aa26.87■■□□□ 1.89
TSPAN3-206ENST00000559373 NTSR2O95665 410 aa26.85■■□□□ 1.89
TSPAN3-206ENST00000559373 SYNE4Q8N205 404 aa26.85■■□□□ 1.89
TSPAN3-206ENST00000559373 RPGRQ92834 1020 aaKnown RBP26.85■■□□□ 1.89
TSPAN3-206ENST00000559373 ERBB4Q15303 1308 aa26.85■■□□□ 1.89
TSPAN3-206ENST00000559373 ZNF541Q9H0D2 1346 aa26.85■■□□□ 1.89
TSPAN3-206ENST00000559373 CRY2Q49AN0 593 aa26.84■■□□□ 1.89
TSPAN3-206ENST00000559373 COPS6Q7L5N1 327 aa26.84■■□□□ 1.89
TSPAN3-206ENST00000559373 KLRG1Q96E93 195 aa26.84■■□□□ 1.89
TSPAN3-206ENST00000559373 RTKN2Q8IZC4 609 aa26.83■■□□□ 1.89
TSPAN3-206ENST00000559373 XAGE3Q8WTP9 111 aa26.83■■□□□ 1.89
TSPAN3-206ENST00000559373 CHL1O00533 1208 aa26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 IARSP41252 1262 aaKnown RBP26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 PPP1R42Q7Z4L9 355 aa26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 PRKRIP1Q9H875 184 aaPredicted RBP26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 BABAM1Q9NWV8 329 aa26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 COL4A5P29400 1685 aa26.81■■□□□ 1.88
TSPAN3-206ENST00000559373 CHPF2Q9P2E5 772 aa26.79■■□□□ 1.88
TSPAN3-206ENST00000559373 IBTKQ9P2D0 1353 aaPredicted RBP26.79■■□□□ 1.88
TSPAN3-206ENST00000559373 SNED1Q8TER0 1413 aa26.79■■□□□ 1.88
TSPAN3-206ENST00000559373 RBM17Q96I25 401 aaKnown RBP26.78■■□□□ 1.88
TSPAN3-206ENST00000559373 UTP14AQ9BVJ6 771 aaKnown RBP26.78■■□□□ 1.88
TSPAN3-206ENST00000559373 DDX60Q8IY21 1712 aaKnown RBP26.78■■□□□ 1.88
TSPAN3-206ENST00000559373 HOXA10P31260 410 aaPredicted RBP26.77■■□□□ 1.88
TSPAN3-206ENST00000559373 IFFO2Q5TF58 517 aa26.77■■□□□ 1.88
TSPAN3-206ENST00000559373 RIC1Q4ADV7 1423 aa26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 PPEF1O14829 653 aaPredicted RBP26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 HCLS1P14317 486 aaPredicted RBP26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 PARP10Q53GL7 1025 aa26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 CHADLQ6NUI6 762 aa26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 NLRP3Q96P20 1036 aa26.76■■□□□ 1.87
TSPAN3-206ENST00000559373 EAPPQ56P03 285 aaPredicted RBP26.75■■□□□ 1.87
TSPAN3-206ENST00000559373 TAF1DQ9H5J8 278 aaPredicted RBP26.75■■□□□ 1.87
TSPAN3-206ENST00000559373 DDX21Q9NR30 783 aaKnown RBP eCLIP26.75■■□□□ 1.87
TSPAN3-206ENST00000559373 RNF123Q5XPI4 1314 aa26.74■■□□□ 1.87
TSPAN3-206ENST00000559373 HDGFL1Q5TGJ6 251 aa26.74■■□□□ 1.87
TSPAN3-206ENST00000559373 NLRP10Q86W26 655 aa26.74■■□□□ 1.87
TSPAN3-206ENST00000559373 CRAMP1Q96RY5 1269 aa26.74■■□□□ 1.87
TSPAN3-206ENST00000559373 APAF1O14727 1248 aa26.73■■□□□ 1.87
TSPAN3-206ENST00000559373 L3MBTL3Q96JM7 780 aaPredicted RBP26.73■■□□□ 1.87
TSPAN3-206ENST00000559373 PSMD1Q99460 953 aa26.73■■□□□ 1.87
TSPAN3-206ENST00000559373 GJA3Q9Y6H8 435 aa26.73■■□□□ 1.87
TSPAN3-206ENST00000559373 LTBP1Q14766 1721 aa26.73■■□□□ 1.87
TSPAN3-206ENST00000559373 IQCA1LA6NCM1 817 aa26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 FZD9O00144 591 aa26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 TCIRG1Q13488 830 aa26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 JMYQ8N9B5 988 aa26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 MBIPQ9NS73 344 aa26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
TSPAN3-206ENST00000559373 ABCC4O15439 1325 aa26.71■■□□□ 1.87
TSPAN3-206ENST00000559373 DUSP27Q5VZP5 1158 aa26.71■■□□□ 1.87
TSPAN3-206ENST00000559373 JDP2Q8WYK2 163 aa26.71■■□□□ 1.87
TSPAN3-206ENST00000559373 CLEC11AQ9Y240 323 aa26.71■■□□□ 1.87
TSPAN3-206ENST00000559373 ADAMTSL1Q8N6G6 1762 aa26.71■■□□□ 1.87
TSPAN3-206ENST00000559373 ELL2O00472 640 aaPredicted RBP26.7■■□□□ 1.86
TSPAN3-206ENST00000559373 SLC10A5Q5PT55 438 aa26.7■■□□□ 1.86
TSPAN3-206ENST00000559373 LARGE2Q8N3Y3 721 aa26.7■■□□□ 1.86
TSPAN3-206ENST00000559373 HACL1Q9UJ83 578 aa26.7■■□□□ 1.86
TSPAN3-206ENST00000559373 ATP5J2-PTCD1G3V325 749 aa26.69■■□□□ 1.86
TSPAN3-206ENST00000559373 CCDC184Q52MB2 194 aa26.69■■□□□ 1.86
TSPAN3-206ENST00000559373 HSP90AB3PQ58FF7 597 aa26.69■■□□□ 1.86
TSPAN3-206ENST00000559373 CC2D2BQ6DHV5 1058 aa26.69■■□□□ 1.86
TSPAN3-206ENST00000559373 CFAP44Q96MT7 982 aa26.69■■□□□ 1.86
TSPAN3-206ENST00000559373 EPHX2P34913 555 aa26.68■■□□□ 1.86
TSPAN3-206ENST00000559373 LDHDQ86WU2 507 aa26.68■■□□□ 1.86
TSPAN3-206ENST00000559373 AOC3Q16853 763 aa26.67■■□□□ 1.86
TSPAN3-206ENST00000559373 RTL5Q5HYW3 569 aaPredicted RBP26.67■■□□□ 1.86
TSPAN3-206ENST00000559373 MKRN1Q9UHC7 482 aaKnown RBP26.67■■□□□ 1.86
TSPAN3-206ENST00000559373 EIF6P56537 245 aaKnown RBP26.66■■□□□ 1.86
TSPAN3-206ENST00000559373 ANKRD13DQ6ZTN6 518 aa26.66■■□□□ 1.86
TSPAN3-206ENST00000559373 GPC2Q8N158 579 aa26.66■■□□□ 1.86
TSPAN3-206ENST00000559373 ATP6V0A2Q9Y487 856 aa26.66■■□□□ 1.86
TSPAN3-206ENST00000559373 COL4A1P02462 1669 aa26.66■■□□□ 1.86
TSPAN3-206ENST00000559373 PPIP5K2O43314 1243 aa26.65■■□□□ 1.86
TSPAN3-206ENST00000559373 PLBD2Q8NHP8 589 aa26.65■■□□□ 1.86
TSPAN3-206ENST00000559373 DBF4Q9UBU7 674 aaPredicted RBP26.65■■□□□ 1.86
TSPAN3-206ENST00000559373 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
TSPAN3-206ENST00000559373 MAP1SQ66K74 1059 aaPredicted RBP26.64■■□□□ 1.86
TSPAN3-206ENST00000559373 FAM89AQ96GI7 184 aa26.64■■□□□ 1.86
TSPAN3-206ENST00000559373 ZNF853P0CG23 659 aa26.63■■□□□ 1.85
TSPAN3-206ENST00000559373 TMX4Q9H1E5 349 aaPredicted RBP26.63■■□□□ 1.85
TSPAN3-206ENST00000559373 TRPM7Q96QT4 1865 aa26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 HOXB7P09629 217 aa26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 COL13A1Q5TAT6 717 aaPredicted RBP26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 DDX46Q7L014 1031 aaKnown RBP26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 NIM1KQ8IY84 436 aa26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 PHAXQ9H814 394 aaKnown RBP26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 CREBZFQ9NS37 354 aa26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 PASKQ96RG2 1323 aa26.62■■□□□ 1.85
TSPAN3-206ENST00000559373 ITGBL1O95965 494 aaPredicted RBP26.61■■□□□ 1.85
TSPAN3-206ENST00000559373 EPS15P42566 896 aa26.61■■□□□ 1.85
TSPAN3-206ENST00000559373 ISCA1Q9BUE6 129 aa26.61■■□□□ 1.85
TSPAN3-206ENST00000559373 LRRC37AA6NMS7 1700 aa26.6■■□□□ 1.85
TSPAN3-206ENST00000559373 C8orf58Q8NAV2 365 aa26.6■■□□□ 1.85
TSPAN3-206ENST00000559373 HYPKQ9NX55 129 aa26.6■■□□□ 1.85
TSPAN3-206ENST00000559373 POLR2AP24928 1970 aaKnown RBP26.6■■□□□ 1.85
TSPAN3-206ENST00000559373 HSPA1AP0DMV8 641 aaKnown RBP26.59■■□□□ 1.85
TSPAN3-206ENST00000559373 HSPA1BP0DMV9 641 aaKnown RBP26.59■■□□□ 1.85
TSPAN3-206ENST00000559373 SCNN1DP51172 638 aa26.59■■□□□ 1.85
TSPAN3-206ENST00000559373 GRIPAP1Q4V328 841 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 702.6 ms