RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
AP3S2-208ENST00000558999 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
AP3S2-208ENST00000558999 COL4A5P29400 1685 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 CELF2O95319 508 aaKnown RBP10.54□□□□□ -0.72
AP3S2-208ENST00000558999 NOGQ13253 232 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 PRPF38BQ5VTL8 546 aaKnown RBP10.54□□□□□ -0.72
AP3S2-208ENST00000558999 CIAPIN1Q6FI81 312 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 TIMELESSQ9UNS1 1208 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
AP3S2-208ENST00000558999 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 USP16Q9Y5T5 823 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 AKAP11Q9UKA4 1901 aa10.54□□□□□ -0.72
AP3S2-208ENST00000558999 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
AP3S2-208ENST00000558999 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
AP3S2-208ENST00000558999 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
AP3S2-208ENST00000558999 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
AP3S2-208ENST00000558999 VPS33BQ9H267 617 aa10.53□□□□□ -0.72
AP3S2-208ENST00000558999 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
AP3S2-208ENST00000558999 HOXA10P31260 410 aaPredicted RBP10.52□□□□□ -0.73
AP3S2-208ENST00000558999 NIM1KQ8IY84 436 aa10.52□□□□□ -0.73
AP3S2-208ENST00000558999 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.73
AP3S2-208ENST00000558999 NUP98P52948 1817 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 SNRPA1P09661 255 aaKnown RBP10.51□□□□□ -0.73
AP3S2-208ENST00000558999 CDC37L1Q7L3B6 337 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 GLIS2Q9BZE0 524 aaPredicted RBP10.51□□□□□ -0.73
AP3S2-208ENST00000558999 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 SAGE1Q9NXZ1 904 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
AP3S2-208ENST00000558999 POLR2AP24928 1970 aaKnown RBP10.5□□□□□ -0.73
AP3S2-208ENST00000558999 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 KCNQ3O43525 872 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 PIP4K2AP48426 406 aaPredicted RBP10.5□□□□□ -0.73
AP3S2-208ENST00000558999 SOX10P56693 466 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 AMER1Q5JTC6 1135 aaPredicted RBP10.5□□□□□ -0.73
AP3S2-208ENST00000558999 CRAMP1Q96RY5 1269 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 CDHR2Q9BYE9 1310 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
AP3S2-208ENST00000558999 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
AP3S2-208ENST00000558999 CXCL9Q07325 125 aa10.49□□□□□ -0.73
AP3S2-208ENST00000558999 NBPF10Q6P3W6 841 aaKnown RBP10.49□□□□□ -0.73
AP3S2-208ENST00000558999 NBPF15Q8N660 670 aa10.49□□□□□ -0.73
AP3S2-208ENST00000558999 RPGRQ92834 1020 aaKnown RBP10.49□□□□□ -0.73
AP3S2-208ENST00000558999 ZNRF3Q9ULT6 936 aa10.49□□□□□ -0.73
AP3S2-208ENST00000558999 NPC1L1Q9UHC9 1359 aa10.49□□□□□ -0.73
AP3S2-208ENST00000558999 PPIP5K2O43314 1243 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 HUNKP57058 714 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 EIF4G2P78344 907 aaKnown RBP eCLIP10.48□□□□□ -0.73
AP3S2-208ENST00000558999 HLFQ16534 295 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 SUPT20HQ8NEM7 779 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 RBM17Q96I25 401 aaKnown RBP10.48□□□□□ -0.73
AP3S2-208ENST00000558999 ZIC5Q96T25 663 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
AP3S2-208ENST00000558999 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
AP3S2-208ENST00000558999 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 ERVV-1B6SEH8 477 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 PPEF1O14829 653 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-208ENST00000558999 GMPSP49915 693 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-208ENST00000558999 HIRAP54198 1017 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-208ENST00000558999 TNIP1Q15025 636 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 RGMBQ6NW40 437 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 NUTM1Q86Y26 1132 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 RTFDC1Q9BY42 306 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-208ENST00000558999 ABCC12Q96J65 1359 aa10.47□□□□□ -0.73
AP3S2-208ENST00000558999 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
AP3S2-208ENST00000558999 FAM155AB1AL88 458 aaPredicted RBP10.46□□□□□ -0.73
AP3S2-208ENST00000558999 AOC3Q16853 763 aa10.46□□□□□ -0.73
AP3S2-208ENST00000558999 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
AP3S2-208ENST00000558999 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.73
AP3S2-208ENST00000558999 RNF186Q9NXI6 227 aa10.46□□□□□ -0.73
AP3S2-208ENST00000558999 LAMB4A4D0S4 1761 aa10.45□□□□□ -0.74
AP3S2-208ENST00000558999 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
AP3S2-208ENST00000558999 TRPA1O75762 1119 aa10.45□□□□□ -0.74
AP3S2-208ENST00000558999 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
AP3S2-208ENST00000558999 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
AP3S2-208ENST00000558999 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
AP3S2-208ENST00000558999 C2orf69Q8N8R5 385 aa10.45□□□□□ -0.74
AP3S2-208ENST00000558999 CNOT7Q9UIV1 285 aaKnown RBP10.45□□□□□ -0.74
AP3S2-208ENST00000558999 ATP6V0A2Q9Y487 856 aa10.45□□□□□ -0.74
AP3S2-208ENST00000558999 COL3A1P02461 1466 aaPredicted RBP10.44□□□□□ -0.74
AP3S2-208ENST00000558999 H7C1D1 291 aa10.44□□□□□ -0.74
AP3S2-208ENST00000558999 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
AP3S2-208ENST00000558999 PKN2Q16513 984 aaKnown RBP10.44□□□□□ -0.74
AP3S2-208ENST00000558999 USP48Q86UV5 1035 aa10.44□□□□□ -0.74
AP3S2-208ENST00000558999 GBA2Q9HCG7 927 aaPredicted RBP10.44□□□□□ -0.74
AP3S2-208ENST00000558999 MAP3K15Q6ZN16 1313 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
AP3S2-208ENST00000558999 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 TRPM4Q8TD43 1214 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
AP3S2-208ENST00000558999 DPF2Q92785 391 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 NLRP3Q96P20 1036 aa10.43□□□□□ -0.74
AP3S2-208ENST00000558999 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
AP3S2-208ENST00000558999 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms