RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
AP3S2-208ENST00000558999 ABCC9O60706 1549 aa18.58■□□□□ 0.56
AP3S2-208ENST00000558999 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
AP3S2-208ENST00000558999 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
AP3S2-208ENST00000558999 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
AP3S2-208ENST00000558999 NACADO15069 1562 aa17.36■□□□□ 0.37
AP3S2-208ENST00000558999 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
AP3S2-208ENST00000558999 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
AP3S2-208ENST00000558999 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
AP3S2-208ENST00000558999 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
AP3S2-208ENST00000558999 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
AP3S2-208ENST00000558999 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
AP3S2-208ENST00000558999 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
AP3S2-208ENST00000558999 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
AP3S2-208ENST00000558999 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
AP3S2-208ENST00000558999 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
AP3S2-208ENST00000558999 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
AP3S2-208ENST00000558999 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
AP3S2-208ENST00000558999 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
AP3S2-208ENST00000558999 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
AP3S2-208ENST00000558999 CUX2O14529 1486 aa16.23■□□□□ 0.19
AP3S2-208ENST00000558999 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
AP3S2-208ENST00000558999 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
AP3S2-208ENST00000558999 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
AP3S2-208ENST00000558999 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
AP3S2-208ENST00000558999 SMARCA2P51531 1590 aa15.85■□□□□ 0.13
AP3S2-208ENST00000558999 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
AP3S2-208ENST00000558999 NESP48681 1621 aa15.83■□□□□ 0.13
AP3S2-208ENST00000558999 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
AP3S2-208ENST00000558999 SMARCA4P51532 1647 aa15.77■□□□□ 0.12
AP3S2-208ENST00000558999 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
AP3S2-208ENST00000558999 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
AP3S2-208ENST00000558999 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.1
AP3S2-208ENST00000558999 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
AP3S2-208ENST00000558999 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
AP3S2-208ENST00000558999 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
AP3S2-208ENST00000558999 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
AP3S2-208ENST00000558999 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
AP3S2-208ENST00000558999 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
AP3S2-208ENST00000558999 WDR62O43379 1518 aa15.49■□□□□ 0.07
AP3S2-208ENST00000558999 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
AP3S2-208ENST00000558999 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
AP3S2-208ENST00000558999 CEP164Q9UPV0 1460 aa15.36■□□□□ 0.05
AP3S2-208ENST00000558999 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
AP3S2-208ENST00000558999 WIZO95785 1651 aa15.27■□□□□ 0.03
AP3S2-208ENST00000558999 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
AP3S2-208ENST00000558999 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
AP3S2-208ENST00000558999 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
AP3S2-208ENST00000558999 CFTRP13569 1480 aa15.24■□□□□ 0.03
AP3S2-208ENST00000558999 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
AP3S2-208ENST00000558999 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
AP3S2-208ENST00000558999 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
AP3S2-208ENST00000558999 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
AP3S2-208ENST00000558999 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
AP3S2-208ENST00000558999 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
AP3S2-208ENST00000558999 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
AP3S2-208ENST00000558999 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
AP3S2-208ENST00000558999 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
AP3S2-208ENST00000558999 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
AP3S2-208ENST00000558999 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
AP3S2-208ENST00000558999 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
AP3S2-208ENST00000558999 CHD1O14646 1710 aa14.97□□□□□ -0.01
AP3S2-208ENST00000558999 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
AP3S2-208ENST00000558999 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
AP3S2-208ENST00000558999 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
AP3S2-208ENST00000558999 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
AP3S2-208ENST00000558999 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
AP3S2-208ENST00000558999 FBLN2P98095 1184 aa14.86□□□□□ -0.03
AP3S2-208ENST00000558999 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
AP3S2-208ENST00000558999 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
AP3S2-208ENST00000558999 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
AP3S2-208ENST00000558999 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
AP3S2-208ENST00000558999 SOGA1O94964 1423 aa14.73□□□□□ -0.05
AP3S2-208ENST00000558999 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
AP3S2-208ENST00000558999 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
AP3S2-208ENST00000558999 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
AP3S2-208ENST00000558999 SNAPC4Q5SXM2 1469 aa14.71□□□□□ -0.05
AP3S2-208ENST00000558999 MAGI1Q96QZ7 1491 aaPredicted RBP14.7□□□□□ -0.06
AP3S2-208ENST00000558999 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
AP3S2-208ENST00000558999 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
AP3S2-208ENST00000558999 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
AP3S2-208ENST00000558999 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
AP3S2-208ENST00000558999 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
AP3S2-208ENST00000558999 CUX1P39880 1505 aa14.55□□□□□ -0.08
AP3S2-208ENST00000558999 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
AP3S2-208ENST00000558999 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
AP3S2-208ENST00000558999 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
AP3S2-208ENST00000558999 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
AP3S2-208ENST00000558999 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
AP3S2-208ENST00000558999 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
AP3S2-208ENST00000558999 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
AP3S2-208ENST00000558999 NUP160Q12769 1436 aa14.42□□□□□ -0.1
AP3S2-208ENST00000558999 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
AP3S2-208ENST00000558999 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
AP3S2-208ENST00000558999 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
AP3S2-208ENST00000558999 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
AP3S2-208ENST00000558999 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
AP3S2-208ENST00000558999 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
AP3S2-208ENST00000558999 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
AP3S2-208ENST00000558999 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms