RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MARSP56192 900 aaKnown RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 PCBP4P57723 403 aaKnown RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 ZNF468Q5VIY5 522 aaPredicted RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 CAPN12Q6ZSI9 719 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 RAB44Q7Z6P3 723 aaPredicted RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 RETREG2Q8NC44 543 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 GALNT6Q8NCL4 622 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 PNMA5Q96PV4 448 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 SAP130Q9H0E3 1048 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 AVENQ9NQS1 362 aaPredicted RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 DNMT3AQ9Y6K1 912 aaPredicted RBP6.52□□□□□ -1.37
SPG11-206ENST00000558093 MICAL2O94851 1124 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 PDE4CQ08493 712 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 GRIN2CQ14957 1233 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 SYT9Q86SS6 491 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 TREML1Q86YW5 311 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 BHMTQ93088 406 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 SLC30A3Q99726 388 aa6.51□□□□□ -1.37
SPG11-206ENST00000558093 SSFA2P28290 1259 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 KCNQ4P56696 695 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 TBC1D8BQ0IIM8 1120 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 PODNQ7Z5L7 613 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 ABTB2Q8N961 1025 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 EDARADDQ8WWZ3 215 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 LRRC4BQ9NT99 713 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 SEPT3Q9UH03 358 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 ADAMTS8Q9UP79 889 aa6.5□□□□□ -1.37
SPG11-206ENST00000558093 RNF225M0QZC1 329 aaPredicted RBP6.49□□□□□ -1.37
SPG11-206ENST00000558093 ARHGEF15O94989 841 aa6.49□□□□□ -1.37
SPG11-206ENST00000558093 RGL4Q8IZJ4 473 aa6.49□□□□□ -1.37
SPG11-206ENST00000558093 DMGDHQ9UI17 866 aaKnown RBP6.49□□□□□ -1.37
SPG11-206ENST00000558093 EPXP11678 715 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 INPP5BP32019 993 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 SCNN1AP37088 669 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 CCINQ13939 588 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 FCHSD1Q86WN1 690 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 ETFBKMTQ8IXQ9 262 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 CMTR1Q8N1G2 835 aaKnown RBP6.48□□□□□ -1.37
SPG11-206ENST00000558093 IGFLR1Q9H665 355 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 FAM13BQ9NYF5 915 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 STIM2Q9P246 746 aa6.48□□□□□ -1.37
SPG11-206ENST00000558093 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
SPG11-206ENST00000558093 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 SIN3BO75182 1162 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 ABL1P00519 1130 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 NFKB1P19838 968 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 ALAS2P22557 587 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
SPG11-206ENST00000558093 KRT25Q7Z3Z0 450 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 HELQQ8TDG4 1101 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
SPG11-206ENST00000558093 SCARF2Q96GP6 870 aaPredicted RBP6.47□□□□□ -1.37
SPG11-206ENST00000558093 UBE2OQ9C0C9 1292 aaKnown RBP6.47□□□□□ -1.37
SPG11-206ENST00000558093 USP20Q9Y2K6 914 aa6.47□□□□□ -1.37
SPG11-206ENST00000558093 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
SPG11-206ENST00000558093 ELOA3CA0A087WX78 387 aaPredicted RBP6.46□□□□□ -1.38
SPG11-206ENST00000558093 ELOA3DA6NLF2 546 aaPredicted RBP6.46□□□□□ -1.38
SPG11-206ENST00000558093 RARAP10276 462 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 ZAP70P43403 619 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 ELOA3BQ3SY89 546 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 ELOA3Q8NG57 546 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 KLF15Q9UIH9 416 aa6.46□□□□□ -1.38
SPG11-206ENST00000558093 PHF20L1A8MW92 1017 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 XYLBO75191 536 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 ADH7P40394 386 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 CHSY3Q70JA7 882 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 PIK3R5Q8WYR1 880 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
SPG11-206ENST00000558093 OPLAHO14841 1288 aa6.44□□□□□ -1.38
SPG11-206ENST00000558093 ARID4AP29374 1257 aaPredicted RBP6.44□□□□□ -1.38
SPG11-206ENST00000558093 MTMR3Q13615 1198 aa6.44□□□□□ -1.38
SPG11-206ENST00000558093 AAMPQ13685 434 aa6.44□□□□□ -1.38
SPG11-206ENST00000558093 GPR152Q8TDT2 470 aa6.44□□□□□ -1.38
SPG11-206ENST00000558093 TNFRSF25Q93038 417 aa6.44□□□□□ -1.38
SPG11-206ENST00000558093 PIK3R2O00459 728 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 SASH3O75995 380 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 PCSK2P16519 638 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 MPSTP25325 297 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 GRNP28799 593 aaKnown RBP6.43□□□□□ -1.38
SPG11-206ENST00000558093 ZNF211Q13398 564 aaPredicted RBP6.43□□□□□ -1.38
SPG11-206ENST00000558093 FAM26DQ5JW98 314 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 PHLDB3Q6NSJ2 640 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 BEND7Q8N7W2 519 aaPredicted RBP6.43□□□□□ -1.38
SPG11-206ENST00000558093 TTC16Q8NEE8 873 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 BTBD6Q96KE9 485 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 ANO2Q9NQ90 1003 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 MKL2Q9ULH7 1088 aa6.43□□□□□ -1.38
SPG11-206ENST00000558093 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
SPG11-206ENST00000558093 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
SPG11-206ENST00000558093 UBAP1LF5GYI3 381 aa6.42□□□□□ -1.38
SPG11-206ENST00000558093 TARSP26639 723 aaKnown RBP6.42□□□□□ -1.38
SPG11-206ENST00000558093 IRS1P35568 1242 aa6.42□□□□□ -1.38
SPG11-206ENST00000558093 NOM1Q5C9Z4 860 aaKnown RBP6.42□□□□□ -1.38
SPG11-206ENST00000558093 ALKBH2Q6NS38 261 aa6.42□□□□□ -1.38
SPG11-206ENST00000558093 KANK3Q6NY19 840 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms