RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
GPHN-215ENST00000557654 DNMT3AQ9Y6K1 912 aaPredicted RBP9.78□□□□□ -0.84
GPHN-215ENST00000557654 TNFRSF10BO14763 440 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 MICAL2O94851 1124 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 ARAFP10398 606 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 SSFA2P28290 1259 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 ETFBKMTQ8IXQ9 262 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 GOLGA6L1Q8N7Z2 621 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 RETREG2Q8NC44 543 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 COL26A1Q96A83 441 aa9.77□□□□□ -0.85
GPHN-215ENST00000557654 PTCD1O75127 700 aaKnown RBP9.76□□□□□ -0.85
GPHN-215ENST00000557654 KCNQ4P56696 695 aa9.76□□□□□ -0.85
GPHN-215ENST00000557654 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
GPHN-215ENST00000557654 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
GPHN-215ENST00000557654 SYT9Q86SS6 491 aa9.76□□□□□ -0.85
GPHN-215ENST00000557654 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
GPHN-215ENST00000557654 TREML1Q86YW5 311 aa9.76□□□□□ -0.85
GPHN-215ENST00000557654 GDF2Q9UK05 429 aaPredicted RBP9.76□□□□□ -0.85
GPHN-215ENST00000557654 INPP5BP32019 993 aa9.75□□□□□ -0.85
GPHN-215ENST00000557654 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
GPHN-215ENST00000557654 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
GPHN-215ENST00000557654 EDARADDQ8WWZ3 215 aa9.75□□□□□ -0.85
GPHN-215ENST00000557654 OPLAHO14841 1288 aa9.74□□□□□ -0.85
GPHN-215ENST00000557654 ADH6P28332 368 aa9.74□□□□□ -0.85
GPHN-215ENST00000557654 BHMTQ93088 406 aa9.74□□□□□ -0.85
GPHN-215ENST00000557654 EPXP11678 715 aa9.73□□□□□ -0.85
GPHN-215ENST00000557654 ARSDP51689 593 aa9.73□□□□□ -0.85
GPHN-215ENST00000557654 ZBTB39O15060 712 aa9.72□□□□□ -0.85
GPHN-215ENST00000557654 BRD2P25440 801 aaKnown RBP9.72□□□□□ -0.85
GPHN-215ENST00000557654 RGL4Q8IZJ4 473 aa9.72□□□□□ -0.85
GPHN-215ENST00000557654 AVENQ9NQS1 362 aaPredicted RBP9.72□□□□□ -0.85
GPHN-215ENST00000557654 ENAMQ9NRM1 1142 aa9.72□□□□□ -0.85
GPHN-215ENST00000557654 USTQ9Y2C2 406 aa9.72□□□□□ -0.85
GPHN-215ENST00000557654 MTMR3Q13615 1198 aa9.71□□□□□ -0.86
GPHN-215ENST00000557654 KRT25Q7Z3Z0 450 aa9.71□□□□□ -0.86
GPHN-215ENST00000557654 GSX2Q9BZM3 304 aa9.71□□□□□ -0.86
GPHN-215ENST00000557654 RTCBQ9Y3I0 505 aaKnown RBP9.71□□□□□ -0.86
GPHN-215ENST00000557654 AMPD1P23109 780 aa9.7□□□□□ -0.86
GPHN-215ENST00000557654 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
GPHN-215ENST00000557654 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
GPHN-215ENST00000557654 CNTNAP5Q8WYK1 1306 aa9.7□□□□□ -0.86
GPHN-215ENST00000557654 EPB42P16452 691 aa9.69□□□□□ -0.86
GPHN-215ENST00000557654 SNRPNP63162 240 aaKnown RBP9.69□□□□□ -0.86
GPHN-215ENST00000557654 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
GPHN-215ENST00000557654 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
GPHN-215ENST00000557654 BTBD6Q96KE9 485 aa9.69□□□□□ -0.86
GPHN-215ENST00000557654 STIM2Q9P246 746 aa9.69□□□□□ -0.86
GPHN-215ENST00000557654 SIN3BO75182 1162 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 NFKB1P19838 968 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 TBC1D8BQ0IIM8 1120 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 CCINQ13939 588 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 IGFLR1Q9H665 355 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
GPHN-215ENST00000557654 SASH3O75995 380 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
GPHN-215ENST00000557654 TARSP26639 723 aaKnown RBP9.67□□□□□ -0.86
GPHN-215ENST00000557654 CHSY3Q70JA7 882 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 ATCAYQ86WG3 371 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 PNMA5Q96PV4 448 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 MDFIQ99750 246 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 ZFATQ9P243 1243 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
GPHN-215ENST00000557654 KCNMB2Q9Y691 235 aa9.67□□□□□ -0.86
GPHN-215ENST00000557654 ELOA3CA0A087WX78 387 aaPredicted RBP9.66□□□□□ -0.86
GPHN-215ENST00000557654 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
GPHN-215ENST00000557654 ZAP70P43403 619 aa9.66□□□□□ -0.86
GPHN-215ENST00000557654 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
GPHN-215ENST00000557654 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
GPHN-215ENST00000557654 ELOA3Q8NG57 546 aa9.66□□□□□ -0.86
GPHN-215ENST00000557654 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
GPHN-215ENST00000557654 MPSTP25325 297 aa9.65□□□□□ -0.86
GPHN-215ENST00000557654 ADH7P40394 386 aa9.65□□□□□ -0.86
GPHN-215ENST00000557654 TRIP4Q15650 581 aaPredicted RBP9.65□□□□□ -0.86
GPHN-215ENST00000557654 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
GPHN-215ENST00000557654 TNFRSF25Q93038 417 aa9.65□□□□□ -0.86
GPHN-215ENST00000557654 XYLBO75191 536 aa9.64□□□□□ -0.87
GPHN-215ENST00000557654 ABL1P00519 1130 aa9.64□□□□□ -0.87
GPHN-215ENST00000557654 IRS1P35568 1242 aa9.64□□□□□ -0.87
GPHN-215ENST00000557654 ZNF211Q13398 564 aaPredicted RBP9.64□□□□□ -0.87
GPHN-215ENST00000557654 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
GPHN-215ENST00000557654 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
GPHN-215ENST00000557654 SERPINB4P48594 390 aa9.63□□□□□ -0.87
GPHN-215ENST00000557654 GSK3AP49840 483 aa9.63□□□□□ -0.87
GPHN-215ENST00000557654 ABTB2Q8N961 1025 aa9.63□□□□□ -0.87
GPHN-215ENST00000557654 SCARF2Q96GP6 870 aaPredicted RBP9.63□□□□□ -0.87
GPHN-215ENST00000557654 RARAP10276 462 aa9.62□□□□□ -0.87
GPHN-215ENST00000557654 DNAJB12Q9NXW2 375 aaKnown RBP9.62□□□□□ -0.87
GPHN-215ENST00000557654 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
GPHN-215ENST00000557654 ALAS2P22557 587 aa9.61□□□□□ -0.87
GPHN-215ENST00000557654 DGKGP49619 791 aa9.61□□□□□ -0.87
GPHN-215ENST00000557654 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
GPHN-215ENST00000557654 EGFRP00533 1210 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 ALBP02768 609 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 EIF1AXP47813 144 aaKnown RBP9.6□□□□□ -0.87
GPHN-215ENST00000557654 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
GPHN-215ENST00000557654 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
GPHN-215ENST00000557654 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms