RNA–Protein interactions for RNA: ENST00000557597.5

NUMB-229, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUMB, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-229ENST00000557597 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUMB-229ENST00000557597 NUCB1Q02818 461 aa8.32□□□□□ -1.08
NUMB-229ENST00000557597 SSH1Q8WYL5 1049 aa8.32□□□□□ -1.08
NUMB-229ENST00000557597 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 BMP2KLQ5H9B9 411 aa8.32□□□□□ -1.08
NUMB-229ENST00000557597 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 ATF7IPQ6VMQ6 1270 aa8.32□□□□□ -1.08
NUMB-229ENST00000557597 NOL8Q76FK4 1167 aaKnown RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
NUMB-229ENST00000557597 C4AP0C0L4 1744 aa8.32□□□□□ -1.08
NUMB-229ENST00000557597 IGSF1Q8N6C5 1336 aa8.31□□□□□ -1.08
NUMB-229ENST00000557597 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
NUMB-229ENST00000557597 WDR63Q8IWG1 891 aa8.31□□□□□ -1.08
NUMB-229ENST00000557597 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
NUMB-229ENST00000557597 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
NUMB-229ENST00000557597 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
NUMB-229ENST00000557597 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
NUMB-229ENST00000557597 KCNJ4P48050 445 aa8.31□□□□□ -1.08
NUMB-229ENST00000557597 CLEC17AQ6ZS10 378 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 RBM46Q8TBY0 533 aaKnown RBP8.3□□□□□ -1.08
NUMB-229ENST00000557597 IPO4Q8TEX9 1081 aaKnown RBP8.3□□□□□ -1.08
NUMB-229ENST00000557597 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 WDR90Q96KV7 1748 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 FSTL1Q12841 308 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 RABEP1Q15276 862 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 NLGN1Q8N2Q7 840 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 CARD14Q9BXL6 1004 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 APBB1O00213 710 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 FYB1O15117 783 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 CDC45O75419 566 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
NUMB-229ENST00000557597 KDRP35968 1356 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 PXDNLA1KZ92 1463 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 RIOK3O14730 519 aaKnown RBP8.29□□□□□ -1.08
NUMB-229ENST00000557597 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
NUMB-229ENST00000557597 ST18O60284 1047 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 TOMM70O94826 608 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 ERICH4A6NGS2 130 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 ERVV-2B6SEH9 535 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 ADCY5O95622 1261 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 MTHFSP49914 203 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 TAF3Q5VWG9 929 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 PAXIP1Q6ZW49 1069 aaPredicted RBP8.29□□□□□ -1.08
NUMB-229ENST00000557597 ZBTB40Q9NUA8 1239 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
NUMB-229ENST00000557597 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 MBD3O95983 291 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 SIK1P57059 783 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 SPC24Q8NBT2 197 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 TRERF1Q96PN7 1200 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 KIF3CO14782 793 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 SYAP1Q96A49 352 aaPredicted RBP8.28□□□□□ -1.08
NUMB-229ENST00000557597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.28□□□□□ -1.08
NUMB-229ENST00000557597 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
NUMB-229ENST00000557597 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
NUMB-229ENST00000557597 CYP27B1O15528 508 aa8.27□□□□□ -1.09
NUMB-229ENST00000557597 CWC22Q9HCG8 908 aaKnown RBP8.27□□□□□ -1.09
NUMB-229ENST00000557597 ZDHHC9Q9Y397 364 aa8.27□□□□□ -1.09
NUMB-229ENST00000557597 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
NUMB-229ENST00000557597 HCLS1P14317 486 aaPredicted RBP8.26□□□□□ -1.09
NUMB-229ENST00000557597 MPRIPQ6WCQ1 1025 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 PIGBQ92521 554 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 GTF2F1P35269 517 aaKnown RBP eCLIP8.26□□□□□ -1.091e-7■■■■■ 28.8
NUMB-229ENST00000557597 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
NUMB-229ENST00000557597 AMOTQ4VCS5 1084 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
NUMB-229ENST00000557597 DLEC1Q9Y238 1755 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
NUMB-229ENST00000557597 PHKG2P15735 406 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 IRX5P78411 483 aaPredicted RBP8.25□□□□□ -1.09
NUMB-229ENST00000557597 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
NUMB-229ENST00000557597 GADD45BO75293 160 aaPredicted RBP8.25□□□□□ -1.09
NUMB-229ENST00000557597 PHF14O94880 888 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
NUMB-229ENST00000557597 JMYQ8N9B5 988 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 LINC00116Q8NCU8 138 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 TAF7LQ5H9L4 462 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 C16orf71Q8IYS4 520 aaPredicted RBP8.25□□□□□ -1.09
NUMB-229ENST00000557597 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
NUMB-229ENST00000557597 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
NUMB-229ENST00000557597 GNPATO15228 680 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 NEK4P51957 841 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 HSP90AB2PQ58FF8 381 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 OGFRQ9NZT2 677 aa8.24□□□□□ -1.09
NUMB-229ENST00000557597 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms