RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 NLRP10Q86W26 655 aa23.18■■□□□ 1.3
XRCC3-217ENST00000556980 RPGRQ92834 1020 aaKnown RBP23.18■■□□□ 1.3
XRCC3-217ENST00000556980 TNRC6CQ9HCJ0 1690 aaKnown RBP23.18■■□□□ 1.3
XRCC3-217ENST00000556980 FANCIQ9NVI1 1328 aa23.17■■□□□ 1.3
XRCC3-217ENST00000556980 NFKBIEO00221 500 aa23.17■■□□□ 1.3
XRCC3-217ENST00000556980 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
XRCC3-217ENST00000556980 TWISTNBQ3B726 338 aaPredicted RBP23.16■■□□□ 1.3
XRCC3-217ENST00000556980 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
XRCC3-217ENST00000556980 STK31Q9BXU1 1019 aa23.15■■□□□ 1.3
XRCC3-217ENST00000556980 PHAXQ9H814 394 aaKnown RBP23.15■■□□□ 1.3
XRCC3-217ENST00000556980 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
XRCC3-217ENST00000556980 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
XRCC3-217ENST00000556980 NLRP3Q96P20 1036 aa23.14■■□□□ 1.29
XRCC3-217ENST00000556980 TAOK3Q9H2K8 898 aa23.14■■□□□ 1.29
XRCC3-217ENST00000556980 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
XRCC3-217ENST00000556980 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
XRCC3-217ENST00000556980 ANKRD36CQ5JPF3 1778 aa23.13■■□□□ 1.29
XRCC3-217ENST00000556980 SLX4Q8IY92 1834 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 DDX58O95786 925 aaKnown RBP23.12■■□□□ 1.29
XRCC3-217ENST00000556980 PRELPP51888 382 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
XRCC3-217ENST00000556980 ISCA1Q9BUE6 129 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
XRCC3-217ENST00000556980 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
XRCC3-217ENST00000556980 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
XRCC3-217ENST00000556980 TCERG1O14776 1098 aaKnown RBP23.11■■□□□ 1.29
XRCC3-217ENST00000556980 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
XRCC3-217ENST00000556980 C1QTNF8P60827 252 aa23.11■■□□□ 1.29
XRCC3-217ENST00000556980 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
XRCC3-217ENST00000556980 HCLS1P14317 486 aaPredicted RBP23.1■■□□□ 1.29
XRCC3-217ENST00000556980 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
XRCC3-217ENST00000556980 RTKN2Q8IZC4 609 aa23.09■■□□□ 1.29
XRCC3-217ENST00000556980 SYNE4Q8N205 404 aa23.09■■□□□ 1.29
XRCC3-217ENST00000556980 CRAMP1Q96RY5 1269 aa23.09■■□□□ 1.29
XRCC3-217ENST00000556980 CCER2I3L3R5 266 aa23.08■■□□□ 1.29
XRCC3-217ENST00000556980 EXOSC9Q06265 439 aaKnown RBP23.08■■□□□ 1.29
XRCC3-217ENST00000556980 TRIM28Q13263 835 aaKnown RBP23.08■■□□□ 1.29
XRCC3-217ENST00000556980 OLFM4Q6UX06 510 aa23.08■■□□□ 1.29
XRCC3-217ENST00000556980 MYD88Q99836 296 aa23.08■■□□□ 1.29
XRCC3-217ENST00000556980 CACNA1SQ13698 1873 aa23.08■■□□□ 1.29
XRCC3-217ENST00000556980 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
XRCC3-217ENST00000556980 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
XRCC3-217ENST00000556980 PPEF1O14829 653 aaPredicted RBP23.06■■□□□ 1.28
XRCC3-217ENST00000556980 SLC4A2P04920 1241 aa23.06■■□□□ 1.28
XRCC3-217ENST00000556980 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
XRCC3-217ENST00000556980 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
XRCC3-217ENST00000556980 MAP3K2Q9Y2U5 619 aa23.06■■□□□ 1.28
XRCC3-217ENST00000556980 SBF1O95248 1867 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 FER1L6Q2WGJ9 1857 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 KIF3CO14782 793 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 CC2D2BQ6DHV5 1058 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
XRCC3-217ENST00000556980 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
XRCC3-217ENST00000556980 PI4KAP2A4QPH2 592 aa23.04■■□□□ 1.28
XRCC3-217ENST00000556980 VAMP4O75379 141 aa23.04■■□□□ 1.28
XRCC3-217ENST00000556980 RTL5Q5HYW3 569 aaPredicted RBP23.04■■□□□ 1.28
XRCC3-217ENST00000556980 PI4KAP1Q8N8J0 262 aa23.04■■□□□ 1.28
XRCC3-217ENST00000556980 TMX4Q9H1E5 349 aaPredicted RBP23.04■■□□□ 1.28
XRCC3-217ENST00000556980 ABCC4O15439 1325 aa23.04■■□□□ 1.28
XRCC3-217ENST00000556980 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
XRCC3-217ENST00000556980 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
XRCC3-217ENST00000556980 ZNF277Q9NRM2 450 aaPredicted RBP23.03■■□□□ 1.28
XRCC3-217ENST00000556980 CWC25Q9NXE8 425 aaPredicted RBP23.03■■□□□ 1.28
XRCC3-217ENST00000556980 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
XRCC3-217ENST00000556980 NEXNQ0ZGT2 675 aa23.02■■□□□ 1.28
XRCC3-217ENST00000556980 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
XRCC3-217ENST00000556980 G2E3Q7L622 706 aa23.02■■□□□ 1.28
XRCC3-217ENST00000556980 ZBTB38Q8NAP3 1195 aaPredicted RBP23.02■■□□□ 1.28
XRCC3-217ENST00000556980 GLTPD2A6NH11 291 aa23.01■■□□□ 1.27
XRCC3-217ENST00000556980 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
XRCC3-217ENST00000556980 HSP90B1P14625 803 aaKnown RBP23.01■■□□□ 1.27
XRCC3-217ENST00000556980 FLIIQ13045 1269 aa23.01■■□□□ 1.27
XRCC3-217ENST00000556980 DPY19L2Q6NUT2 758 aa23■■□□□ 1.27
XRCC3-217ENST00000556980 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
XRCC3-217ENST00000556980 PSMD1Q99460 953 aa23■■□□□ 1.27
XRCC3-217ENST00000556980 ATP6V0A2Q9Y487 856 aa23■■□□□ 1.27
XRCC3-217ENST00000556980 BBOX1O75936 387 aa22.99■■□□□ 1.27
XRCC3-217ENST00000556980 PCCAP05165 728 aaPredicted RBP22.99■■□□□ 1.27
XRCC3-217ENST00000556980 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
XRCC3-217ENST00000556980 GRAPQ13588 217 aa22.99■■□□□ 1.27
XRCC3-217ENST00000556980 GRAPLQ8TC17 118 aaPredicted RBP22.99■■□□□ 1.27
XRCC3-217ENST00000556980 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
XRCC3-217ENST00000556980 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
XRCC3-217ENST00000556980 IARSP41252 1262 aaKnown RBP22.98■■□□□ 1.27
XRCC3-217ENST00000556980 SF3B3Q15393 1217 aaKnown RBP22.98■■□□□ 1.27
XRCC3-217ENST00000556980 SLC51AQ86UW1 340 aa22.98■■□□□ 1.27
XRCC3-217ENST00000556980 E9PSI1 815 aa22.97■■□□□ 1.27
XRCC3-217ENST00000556980 TOMM70O94826 608 aa22.97■■□□□ 1.27
XRCC3-217ENST00000556980 DIEXFQ68CQ4 756 aaKnown RBP22.97■■□□□ 1.27
XRCC3-217ENST00000556980 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
XRCC3-217ENST00000556980 DDX60Q8IY21 1712 aaKnown RBP22.96■■□□□ 1.27
XRCC3-217ENST00000556980 LAMB2P55268 1798 aa22.96■■□□□ 1.27
XRCC3-217ENST00000556980 CWF19L2Q2TBE0 894 aaKnown RBP22.95■■□□□ 1.26
XRCC3-217ENST00000556980 TMC4Q7Z404 712 aa22.95■■□□□ 1.26
XRCC3-217ENST00000556980 JARID2Q92833 1246 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms