RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 SLFN5Q08AF3 891 aa28.96■■■□□ 2.23
PABPN1-206ENST00000556809 TWISTNBQ3B726 338 aaPredicted RBP28.96■■■□□ 2.23
PABPN1-206ENST00000556809 PPP1R42Q7Z4L9 355 aa28.96■■■□□ 2.23
PABPN1-206ENST00000556809 CNKSR1Q969H4 720 aa28.96■■■□□ 2.23
PABPN1-206ENST00000556809 PHAXQ9H814 394 aaKnown RBP28.96■■■□□ 2.23
PABPN1-206ENST00000556809 NPR1P16066 1061 aa28.95■■■□□ 2.22
PABPN1-206ENST00000556809 CRY2Q49AN0 593 aa28.95■■■□□ 2.22
PABPN1-206ENST00000556809 NLRP10Q86W26 655 aa28.95■■■□□ 2.22
PABPN1-206ENST00000556809 CDCA7LQ96GN5 454 aa28.94■■■□□ 2.22
PABPN1-206ENST00000556809 UTP14AQ9BVJ6 771 aaKnown RBP28.93■■■□□ 2.22
PABPN1-206ENST00000556809 FER1L6Q2WGJ9 1857 aa28.93■■■□□ 2.22
PABPN1-206ENST00000556809 SLC10A5Q5PT55 438 aa28.92■■■□□ 2.22
PABPN1-206ENST00000556809 PRPF40BQ6NWY9 871 aaKnown RBP28.92■■■□□ 2.22
PABPN1-206ENST00000556809 ISCA1Q9BUE6 129 aa28.92■■■□□ 2.22
PABPN1-206ENST00000556809 RNF123Q5XPI4 1314 aa28.92■■■□□ 2.22
PABPN1-206ENST00000556809 C21orf2O43822 256 aa28.9■■■□□ 2.22
PABPN1-206ENST00000556809 C7orf43Q8WVR3 580 aa28.9■■■□□ 2.22
PABPN1-206ENST00000556809 PRELPP51888 382 aa28.89■■■□□ 2.22
PABPN1-206ENST00000556809 C9orf131Q5VYM1 1079 aa28.89■■■□□ 2.22
PABPN1-206ENST00000556809 TRMT2AQ8IZ69 625 aaKnown RBP28.89■■■□□ 2.22
PABPN1-206ENST00000556809 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.21
PABPN1-206ENST00000556809 NFKBIEO00221 500 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 VAMP4O75379 141 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 RASSF7Q02833 373 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 TRIM28Q13263 835 aaKnown RBP28.88■■■□□ 2.21
PABPN1-206ENST00000556809 C3orf67Q6ZVT6 689 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 CCDC88AQ3V6T2 1871 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 CACNA1FO60840 1977 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 LAMB2P55268 1798 aa28.88■■■□□ 2.21
PABPN1-206ENST00000556809 HOXA10P31260 410 aaPredicted RBP28.87■■■□□ 2.21
PABPN1-206ENST00000556809 RIC3Q7Z5B4 369 aa28.87■■■□□ 2.21
PABPN1-206ENST00000556809 ZNF219Q9P2Y4 722 aaPredicted RBP28.87■■■□□ 2.21
PABPN1-206ENST00000556809 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
PABPN1-206ENST00000556809 ALDH1B1P30837 517 aa28.86■■■□□ 2.21
PABPN1-206ENST00000556809 SYNE4Q8N205 404 aa28.86■■■□□ 2.21
PABPN1-206ENST00000556809 TRMT112Q9UI30 125 aaKnown RBP28.86■■■□□ 2.21
PABPN1-206ENST00000556809 ATP5J2-PTCD1G3V325 749 aa28.85■■■□□ 2.21
PABPN1-206ENST00000556809 STK31Q9BXU1 1019 aa28.85■■■□□ 2.21
PABPN1-206ENST00000556809 DDX60Q8IY21 1712 aaKnown RBP28.84■■■□□ 2.21
PABPN1-206ENST00000556809 NLRP3Q96P20 1036 aa28.84■■■□□ 2.21
PABPN1-206ENST00000556809 SH3TC1Q8TE82 1336 aa28.84■■■□□ 2.21
PABPN1-206ENST00000556809 SLC4A2P04920 1241 aa28.83■■■□□ 2.21
PABPN1-206ENST00000556809 G2E3Q7L622 706 aa28.83■■■□□ 2.21
PABPN1-206ENST00000556809 RNF181Q9P0P0 153 aa28.83■■■□□ 2.21
PABPN1-206ENST00000556809 DDX58O95786 925 aaKnown RBP28.82■■■□□ 2.2
PABPN1-206ENST00000556809 LMNB1P20700 586 aa28.82■■■□□ 2.2
PABPN1-206ENST00000556809 SOGA3Q5TF21 947 aa28.82■■■□□ 2.2
PABPN1-206ENST00000556809 METTL22Q9BUU2 404 aaPredicted RBP28.82■■■□□ 2.2
PABPN1-206ENST00000556809 LTBP3Q9NS15 1303 aa28.82■■■□□ 2.2
PABPN1-206ENST00000556809 DICER1Q9UPY3 1922 aaKnown RBP28.81■■■□□ 2.2
PABPN1-206ENST00000556809 HCLS1P14317 486 aaPredicted RBP28.81■■■□□ 2.2
PABPN1-206ENST00000556809 KSR2Q6VAB6 950 aa28.81■■■□□ 2.2
PABPN1-206ENST00000556809 RPGRQ92834 1020 aaKnown RBP28.81■■■□□ 2.2
PABPN1-206ENST00000556809 ZNF428Q96B54 188 aa28.81■■■□□ 2.2
PABPN1-206ENST00000556809 CRAMP1Q96RY5 1269 aa28.81■■■□□ 2.2
PABPN1-206ENST00000556809 MYD88Q99836 296 aa28.8■■■□□ 2.2
PABPN1-206ENST00000556809 SNED1Q8TER0 1413 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 PI4KAP2A4QPH2 592 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 OLFM4Q6UX06 510 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 PI4KAP1Q8N8J0 262 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 FAM89AQ96GI7 184 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 RBM17Q96I25 401 aaKnown RBP28.79■■■□□ 2.2
PABPN1-206ENST00000556809 MAP3K2Q9Y2U5 619 aa28.79■■■□□ 2.2
PABPN1-206ENST00000556809 TAOK3Q9H2K8 898 aa28.78■■■□□ 2.2
PABPN1-206ENST00000556809 GPBP1L1Q9HC44 474 aaPredicted RBP28.78■■■□□ 2.2
PABPN1-206ENST00000556809 CCDC93Q567U6 631 aa28.77■■■□□ 2.2
PABPN1-206ENST00000556809 CCDC191Q8NCU4 936 aa28.77■■■□□ 2.2
PABPN1-206ENST00000556809 ZNF526Q8TF50 670 aaPredicted RBP28.77■■■□□ 2.2
PABPN1-206ENST00000556809 TIAM2Q8IVF5 1701 aa28.77■■■□□ 2.2
PABPN1-206ENST00000556809 ZC3H4Q9UPT8 1303 aaKnown RBP28.76■■■□□ 2.19
PABPN1-206ENST00000556809 FLIIQ13045 1269 aa28.76■■■□□ 2.19
PABPN1-206ENST00000556809 ZBTB38Q8NAP3 1195 aaPredicted RBP28.75■■■□□ 2.19
PABPN1-206ENST00000556809 IGKV5-2P06315 115 aa28.74■■■□□ 2.19
PABPN1-206ENST00000556809 ABCC4O15439 1325 aa28.73■■■□□ 2.19
PABPN1-206ENST00000556809 CT47B1P0C2W7 299 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-206ENST00000556809 TAF1P21675 1872 aa28.73■■■□□ 2.19
PABPN1-206ENST00000556809 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
PABPN1-206ENST00000556809 CWC25Q9NXE8 425 aaPredicted RBP28.73■■■□□ 2.19
PABPN1-206ENST00000556809 SF3B3Q15393 1217 aaKnown RBP28.72■■■□□ 2.19
PABPN1-206ENST00000556809 RTL5Q5HYW3 569 aaPredicted RBP28.72■■■□□ 2.19
PABPN1-206ENST00000556809 CC2D2BQ6DHV5 1058 aa28.72■■■□□ 2.19
PABPN1-206ENST00000556809 IRS4O14654 1257 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-206ENST00000556809 PCCAP05165 728 aaPredicted RBP28.71■■■□□ 2.19
PABPN1-206ENST00000556809 FKBP4Q02790 459 aaKnown RBP eCLIP28.71■■■□□ 2.19
PABPN1-206ENST00000556809 SLC51AQ86UW1 340 aa28.71■■■□□ 2.19
PABPN1-206ENST00000556809 PPEF1O14829 653 aaPredicted RBP28.7■■■□□ 2.18
PABPN1-206ENST00000556809 KIF3CO14782 793 aa28.68■■■□□ 2.18
PABPN1-206ENST00000556809 FKBP5Q13451 457 aaPredicted RBP28.68■■■□□ 2.18
PABPN1-206ENST00000556809 DDX46Q7L014 1031 aaKnown RBP28.68■■■□□ 2.18
PABPN1-206ENST00000556809 PSMD1Q99460 953 aa28.68■■■□□ 2.18
PABPN1-206ENST00000556809 NEURL1BA8MQ27 555 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 BBOX1O75936 387 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 NEXNQ0ZGT2 675 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 CWF19L2Q2TBE0 894 aaKnown RBP28.67■■■□□ 2.18
PABPN1-206ENST00000556809 GRIPAP1Q4V328 841 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 SSH1Q8WYL5 1049 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 ATP6V0A2Q9Y487 856 aa28.67■■■□□ 2.18
PABPN1-206ENST00000556809 GRAPQ13588 217 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 ALDH1L2Q3SY69 923 aa28.66■■■□□ 2.18
PABPN1-206ENST00000556809 GRAPLQ8TC17 118 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms