RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
TUBB3-212ENST00000556565 PRPF40BQ6NWY9 871 aaKnown RBP22.65■■□□□ 1.22
TUBB3-212ENST00000556565 CRY2Q49AN0 593 aa22.64■■□□□ 1.21
TUBB3-212ENST00000556565 STK31Q9BXU1 1019 aa22.64■■□□□ 1.21
TUBB3-212ENST00000556565 SLX4Q8IY92 1834 aa22.64■■□□□ 1.21
TUBB3-212ENST00000556565 TCERG1O14776 1098 aaKnown RBP22.63■■□□□ 1.21
TUBB3-212ENST00000556565 EXOSC9Q06265 439 aaKnown RBP22.63■■□□□ 1.21
TUBB3-212ENST00000556565 ISCA1Q9BUE6 129 aa22.63■■□□□ 1.21
TUBB3-212ENST00000556565 CACNA1SQ13698 1873 aa22.62■■□□□ 1.21
TUBB3-212ENST00000556565 C21orf2O43822 256 aa22.62■■□□□ 1.21
TUBB3-212ENST00000556565 RASSF7Q02833 373 aa22.62■■□□□ 1.21
TUBB3-212ENST00000556565 RIC3Q7Z5B4 369 aa22.62■■□□□ 1.21
TUBB3-212ENST00000556565 ZNF219Q9P2Y4 722 aaPredicted RBP22.62■■□□□ 1.21
TUBB3-212ENST00000556565 ATP5J2-PTCD1G3V325 749 aa22.61■■□□□ 1.21
TUBB3-212ENST00000556565 C9orf131Q5VYM1 1079 aa22.61■■□□□ 1.21
TUBB3-212ENST00000556565 TRMT112Q9UI30 125 aaKnown RBP22.61■■□□□ 1.21
TUBB3-212ENST00000556565 NFKBIEO00221 500 aa22.6■■□□□ 1.21
TUBB3-212ENST00000556565 DDX58O95786 925 aaKnown RBP22.6■■□□□ 1.21
TUBB3-212ENST00000556565 SLC10A5Q5PT55 438 aa22.6■■□□□ 1.21
TUBB3-212ENST00000556565 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
TUBB3-212ENST00000556565 MIER1Q8N108 512 aa22.6■■□□□ 1.21
TUBB3-212ENST00000556565 SH3TC1Q8TE82 1336 aa22.59■■□□□ 1.21
TUBB3-212ENST00000556565 VAMP4O75379 141 aa22.59■■□□□ 1.21
TUBB3-212ENST00000556565 RPGRQ92834 1020 aaKnown RBP22.59■■□□□ 1.21
TUBB3-212ENST00000556565 ZNF428Q96B54 188 aa22.59■■□□□ 1.21
TUBB3-212ENST00000556565 HOXA10P31260 410 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-212ENST00000556565 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
TUBB3-212ENST00000556565 SYNE4Q8N205 404 aa22.58■■□□□ 1.21
TUBB3-212ENST00000556565 NLRP3Q96P20 1036 aa22.58■■□□□ 1.21
TUBB3-212ENST00000556565 RNF181Q9P0P0 153 aa22.58■■□□□ 1.21
TUBB3-212ENST00000556565 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 ALDH1B1P30837 517 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 G2E3Q7L622 706 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 C7orf43Q8WVR3 580 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 MYD88Q99836 296 aa22.57■■□□□ 1.2
TUBB3-212ENST00000556565 SBF1O95248 1867 aa22.56■■□□□ 1.2
TUBB3-212ENST00000556565 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
TUBB3-212ENST00000556565 HCLS1P14317 486 aaPredicted RBP22.56■■□□□ 1.2
TUBB3-212ENST00000556565 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
TUBB3-212ENST00000556565 MAP3K2Q9Y2U5 619 aa22.56■■□□□ 1.2
TUBB3-212ENST00000556565 LMNB1P20700 586 aa22.55■■□□□ 1.2
TUBB3-212ENST00000556565 PRELPP51888 382 aa22.55■■□□□ 1.2
TUBB3-212ENST00000556565 KSR2Q6VAB6 950 aa22.55■■□□□ 1.2
TUBB3-212ENST00000556565 LTBP3Q9NS15 1303 aa22.55■■□□□ 1.2
TUBB3-212ENST00000556565 LAMB2P55268 1798 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 PI4KAP2A4QPH2 592 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 E9PSI1 815 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 FLIIQ13045 1269 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 CCDC93Q567U6 631 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 PI4KAP1Q8N8J0 262 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 ZNF526Q8TF50 670 aaPredicted RBP22.54■■□□□ 1.2
TUBB3-212ENST00000556565 FAM89AQ96GI7 184 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
TUBB3-212ENST00000556565 CRAMP1Q96RY5 1269 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 TAOK3Q9H2K8 898 aa22.54■■□□□ 1.2
TUBB3-212ENST00000556565 DDX60Q8IY21 1712 aaKnown RBP22.54■■□□□ 1.2
TUBB3-212ENST00000556565 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
TUBB3-212ENST00000556565 CCDC191Q8NCU4 936 aa22.52■■□□□ 1.2
TUBB3-212ENST00000556565 GPBP1L1Q9HC44 474 aaPredicted RBP22.52■■□□□ 1.2
TUBB3-212ENST00000556565 CACNA1FO60840 1977 aa22.51■■□□□ 1.19
TUBB3-212ENST00000556565 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
TUBB3-212ENST00000556565 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
TUBB3-212ENST00000556565 CWC25Q9NXE8 425 aaPredicted RBP22.51■■□□□ 1.19
TUBB3-212ENST00000556565 ABCC4O15439 1325 aa22.51■■□□□ 1.19
TUBB3-212ENST00000556565 TIAM2Q8IVF5 1701 aa22.51■■□□□ 1.19
TUBB3-212ENST00000556565 SNED1Q8TER0 1413 aa22.5■■□□□ 1.19
TUBB3-212ENST00000556565 PPEF1O14829 653 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-212ENST00000556565 FKBP5Q13451 457 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-212ENST00000556565 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-212ENST00000556565 ZC3H4Q9UPT8 1303 aaKnown RBP22.5■■□□□ 1.19
TUBB3-212ENST00000556565 IRS4O14654 1257 aaPredicted RBP22.49■■□□□ 1.19
TUBB3-212ENST00000556565 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
TUBB3-212ENST00000556565 NEXNQ0ZGT2 675 aa22.49■■□□□ 1.19
TUBB3-212ENST00000556565 CDCA7LQ96GN5 454 aa22.49■■□□□ 1.19
TUBB3-212ENST00000556565 PCCAP05165 728 aaPredicted RBP22.48■■□□□ 1.19
TUBB3-212ENST00000556565 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
TUBB3-212ENST00000556565 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
TUBB3-212ENST00000556565 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.192e-6■■■■□ 22.8
TUBB3-212ENST00000556565 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
TUBB3-212ENST00000556565 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
TUBB3-212ENST00000556565 NEURL1BA8MQ27 555 aa22.46■■□□□ 1.19
TUBB3-212ENST00000556565 SF3B3Q15393 1217 aaKnown RBP22.46■■□□□ 1.19
TUBB3-212ENST00000556565 CWF19L2Q2TBE0 894 aaKnown RBP22.46■■□□□ 1.19
TUBB3-212ENST00000556565 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
TUBB3-212ENST00000556565 DNAAF4Q8WXU2 420 aa22.46■■□□□ 1.19
TUBB3-212ENST00000556565 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
TUBB3-212ENST00000556565 GRAPQ13588 217 aa22.44■■□□□ 1.18
TUBB3-212ENST00000556565 TRMT2AQ8IZ69 625 aaKnown RBP22.44■■□□□ 1.18
TUBB3-212ENST00000556565 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
TUBB3-212ENST00000556565 JARID2Q92833 1246 aaPredicted RBP22.44■■□□□ 1.18
TUBB3-212ENST00000556565 PSMD1Q99460 953 aa22.44■■□□□ 1.18
TUBB3-212ENST00000556565 DICER1Q9UPY3 1922 aaKnown RBP22.44■■□□□ 1.18
TUBB3-212ENST00000556565 KDM2BQ8NHM5 1336 aa22.43■■□□□ 1.18
TUBB3-212ENST00000556565 CDHR2Q9BYE9 1310 aa22.43■■□□□ 1.18
TUBB3-212ENST00000556565 BBOX1O75936 387 aa22.43■■□□□ 1.18
TUBB3-212ENST00000556565 ZNF277Q9NRM2 450 aaPredicted RBP22.43■■□□□ 1.18
TUBB3-212ENST00000556565 ATP6V0A2Q9Y487 856 aa22.43■■□□□ 1.18
TUBB3-212ENST00000556565 GRIPAP1Q4V328 841 aa22.42■■□□□ 1.18
TUBB3-212ENST00000556565 LINS1Q8NG48 757 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms