RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
SNX6-207ENST00000556303 UTP14AQ9BVJ6 771 aaKnown RBP16.38■□□□□ 0.21
SNX6-207ENST00000556303 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
SNX6-207ENST00000556303 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
SNX6-207ENST00000556303 ANP32CO43423 234 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
SNX6-207ENST00000556303 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 CCDC27Q2M243 656 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
SNX6-207ENST00000556303 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
SNX6-207ENST00000556303 ANXA1P04083 346 aa16.36■□□□□ 0.21
SNX6-207ENST00000556303 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNX6-207ENST00000556303 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
SNX6-207ENST00000556303 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
SNX6-207ENST00000556303 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
SNX6-207ENST00000556303 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
SNX6-207ENST00000556303 ABCC12Q96J65 1359 aa16.36■□□□□ 0.21
SNX6-207ENST00000556303 TNRC6CQ9HCJ0 1690 aaKnown RBP16.35■□□□□ 0.21
SNX6-207ENST00000556303 APLP1P51693 650 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 AIMP1Q12904 312 aaKnown RBP16.35■□□□□ 0.21
SNX6-207ENST00000556303 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 PSMD1Q99460 953 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
SNX6-207ENST00000556303 NLRP10Q86W26 655 aa16.34■□□□□ 0.21
SNX6-207ENST00000556303 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
SNX6-207ENST00000556303 SMC1BQ8NDV3 1235 aa16.32■□□□□ 0.2
SNX6-207ENST00000556303 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
SNX6-207ENST00000556303 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
SNX6-207ENST00000556303 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
SNX6-207ENST00000556303 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
SNX6-207ENST00000556303 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
SNX6-207ENST00000556303 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
SNX6-207ENST00000556303 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
SNX6-207ENST00000556303 TIAM2Q8IVF5 1701 aa16.31■□□□□ 0.2
SNX6-207ENST00000556303 IL16Q14005 1332 aa16.3■□□□□ 0.2
SNX6-207ENST00000556303 BBOX1O75936 387 aa16.3■□□□□ 0.2
SNX6-207ENST00000556303 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
SNX6-207ENST00000556303 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
SNX6-207ENST00000556303 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
SNX6-207ENST00000556303 SNED1Q8TER0 1413 aa16.29■□□□□ 0.2
SNX6-207ENST00000556303 IQCA1LA6NCM1 817 aa16.29■□□□□ 0.2
SNX6-207ENST00000556303 POTECB2RU33 542 aa16.29■□□□□ 0.2
SNX6-207ENST00000556303 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
SNX6-207ENST00000556303 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
SNX6-207ENST00000556303 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
SNX6-207ENST00000556303 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
SNX6-207ENST00000556303 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
SNX6-207ENST00000556303 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
SNX6-207ENST00000556303 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 FZD9O00144 591 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
SNX6-207ENST00000556303 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 JDP2Q8WYK2 163 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
SNX6-207ENST00000556303 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
SNX6-207ENST00000556303 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
SNX6-207ENST00000556303 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
SNX6-207ENST00000556303 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
SNX6-207ENST00000556303 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
SNX6-207ENST00000556303 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.2
SNX6-207ENST00000556303 DDNO94850 711 aaPredicted RBP16.26■□□□□ 0.19
SNX6-207ENST00000556303 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
SNX6-207ENST00000556303 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
SNX6-207ENST00000556303 ABCC4O15439 1325 aa16.25■□□□□ 0.19
SNX6-207ENST00000556303 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
SNX6-207ENST00000556303 GRAPQ13588 217 aa16.25■□□□□ 0.19
SNX6-207ENST00000556303 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
SNX6-207ENST00000556303 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
SNX6-207ENST00000556303 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
SNX6-207ENST00000556303 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
SNX6-207ENST00000556303 PCNTO95613 3336 aa16.25■□□□□ 0.19
SNX6-207ENST00000556303 GPC2Q8N158 579 aa16.24■□□□□ 0.19
SNX6-207ENST00000556303 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
SNX6-207ENST00000556303 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
SNX6-207ENST00000556303 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
SNX6-207ENST00000556303 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
SNX6-207ENST00000556303 ATP5J2-PTCD1G3V325 749 aa16.23■□□□□ 0.19
SNX6-207ENST00000556303 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
SNX6-207ENST00000556303 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
SNX6-207ENST00000556303 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
SNX6-207ENST00000556303 SCN4AP35499 1836 aa16.23■□□□□ 0.19
SNX6-207ENST00000556303 EIF6P56537 245 aaKnown RBP16.22■□□□□ 0.19
SNX6-207ENST00000556303 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
SNX6-207ENST00000556303 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
SNX6-207ENST00000556303 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
SNX6-207ENST00000556303 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
SNX6-207ENST00000556303 IRS4O14654 1257 aaPredicted RBP16.21■□□□□ 0.19
SNX6-207ENST00000556303 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
SNX6-207ENST00000556303 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
SNX6-207ENST00000556303 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
SNX6-207ENST00000556303 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
SNX6-207ENST00000556303 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms