RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
APEX1-213ENST00000556296 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
APEX1-213ENST00000556296 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
APEX1-213ENST00000556296 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
APEX1-213ENST00000556296 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
APEX1-213ENST00000556296 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
APEX1-213ENST00000556296 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
APEX1-213ENST00000556296 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
APEX1-213ENST00000556296 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
APEX1-213ENST00000556296 PSMD1Q99460 953 aa16.55■□□□□ 0.24
APEX1-213ENST00000556296 MYL6BP14649 208 aa16.54■□□□□ 0.24
APEX1-213ENST00000556296 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
APEX1-213ENST00000556296 GPC2Q8N158 579 aa16.54■□□□□ 0.24
APEX1-213ENST00000556296 MKRN1Q9UHC7 482 aaKnown RBP16.54■□□□□ 0.24
APEX1-213ENST00000556296 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 FZD9O00144 591 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
APEX1-213ENST00000556296 EPHX2P34913 555 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 PARP10Q53GL7 1025 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
APEX1-213ENST00000556296 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
APEX1-213ENST00000556296 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
APEX1-213ENST00000556296 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
APEX1-213ENST00000556296 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 GPTP24298 496 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
APEX1-213ENST00000556296 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
APEX1-213ENST00000556296 PASKQ96RG2 1323 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 ZNF541Q9H0D2 1346 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 CAPN15O75808 1086 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
APEX1-213ENST00000556296 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 LARGE2Q8N3Y3 721 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
APEX1-213ENST00000556296 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
APEX1-213ENST00000556296 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
APEX1-213ENST00000556296 CALD1Q05682 793 aaKnown RBP16.49■□□□□ 0.23
APEX1-213ENST00000556296 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 SUPT20HQ8NEM7 779 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
APEX1-213ENST00000556296 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
APEX1-213ENST00000556296 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
APEX1-213ENST00000556296 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
APEX1-213ENST00000556296 NIM1KQ8IY84 436 aa16.48■□□□□ 0.23
APEX1-213ENST00000556296 ZNF34Q8IZ26 560 aa16.48■□□□□ 0.23
APEX1-213ENST00000556296 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
APEX1-213ENST00000556296 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
APEX1-213ENST00000556296 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
APEX1-213ENST00000556296 PDIA6Q15084 440 aa16.47■□□□□ 0.23
APEX1-213ENST00000556296 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
APEX1-213ENST00000556296 ABCC12Q96J65 1359 aa16.47■□□□□ 0.23
APEX1-213ENST00000556296 PCNTO95613 3336 aa16.46■□□□□ 0.23
APEX1-213ENST00000556296 CTCFP49711 727 aaPredicted RBP16.46■□□□□ 0.23
APEX1-213ENST00000556296 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 BBOX1O75936 387 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 NTSR2O95665 410 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 DEFB115Q30KQ5 88 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 PRDM10Q9NQV6 1147 aa16.45■□□□□ 0.22
APEX1-213ENST00000556296 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
APEX1-213ENST00000556296 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
APEX1-213ENST00000556296 PPIP5K2O43314 1243 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 VEGFBP49765 207 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
APEX1-213ENST00000556296 MAP1SQ66K74 1059 aaPredicted RBP16.44■□□□□ 0.22
APEX1-213ENST00000556296 USP50Q70EL3 339 aaPredicted RBP16.44■□□□□ 0.22
APEX1-213ENST00000556296 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
APEX1-213ENST00000556296 CHL1O00533 1208 aa16.43■□□□□ 0.22
APEX1-213ENST00000556296 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
APEX1-213ENST00000556296 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
APEX1-213ENST00000556296 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
APEX1-213ENST00000556296 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
APEX1-213ENST00000556296 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
APEX1-213ENST00000556296 ECE1P42892 770 aa16.42■□□□□ 0.22
APEX1-213ENST00000556296 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
APEX1-213ENST00000556296 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
APEX1-213ENST00000556296 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
APEX1-213ENST00000556296 SCN4AP35499 1836 aa16.42■□□□□ 0.22
APEX1-213ENST00000556296 IL16Q14005 1332 aa16.42■□□□□ 0.22
APEX1-213ENST00000556296 FOXN1O15353 648 aa16.41■□□□□ 0.22
APEX1-213ENST00000556296 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
APEX1-213ENST00000556296 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
APEX1-213ENST00000556296 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
APEX1-213ENST00000556296 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
APEX1-213ENST00000556296 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
APEX1-213ENST00000556296 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms