RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 IQCA1LA6NCM1 817 aa28.17■■■□□ 2.1
SDR39U1-216ENST00000556175 DDNO94850 711 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-216ENST00000556175 RBM17Q96I25 401 aaKnown RBP28.17■■■□□ 2.1
SDR39U1-216ENST00000556175 PSMD1Q99460 953 aa28.17■■■□□ 2.1
SDR39U1-216ENST00000556175 ANXA1P04083 346 aa28.16■■■□□ 2.1
SDR39U1-216ENST00000556175 OLFM4Q6UX06 510 aa28.16■■■□□ 2.1
SDR39U1-216ENST00000556175 KLRG1Q96E93 195 aa28.16■■■□□ 2.1
SDR39U1-216ENST00000556175 UTP14AQ9BVJ6 771 aaKnown RBP28.16■■■□□ 2.1
SDR39U1-216ENST00000556175 DDX21Q9NR30 783 aaKnown RBP eCLIP28.16■■■□□ 2.1
SDR39U1-216ENST00000556175 ANKRD36CQ5JPF3 1778 aa28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 HOXB7P09629 217 aa28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 IARSP41252 1262 aaKnown RBP28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 COPS6Q7L5N1 327 aa28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 NLRP3Q96P20 1036 aa28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 CRAMP1Q96RY5 1269 aa28.15■■■□□ 2.1
SDR39U1-216ENST00000556175 HTRA3P83110 453 aa28.14■■■□□ 2.1
SDR39U1-216ENST00000556175 SYNE4Q8N205 404 aa28.14■■■□□ 2.1
SDR39U1-216ENST00000556175 XAGE3Q8WTP9 111 aa28.14■■■□□ 2.1
SDR39U1-216ENST00000556175 NECTIN2Q92692 538 aa28.14■■■□□ 2.1
SDR39U1-216ENST00000556175 L3MBTL3Q96JM7 780 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-216ENST00000556175 SNED1Q8TER0 1413 aa28.13■■■□□ 2.09
SDR39U1-216ENST00000556175 AIMP1Q12904 312 aaKnown RBP28.13■■■□□ 2.09
SDR39U1-216ENST00000556175 SCN4AP35499 1836 aa28.13■■■□□ 2.09
SDR39U1-216ENST00000556175 SLC10A5Q5PT55 438 aa28.12■■■□□ 2.09
SDR39U1-216ENST00000556175 HDGFL1Q5TGJ6 251 aa28.12■■■□□ 2.09
SDR39U1-216ENST00000556175 CFAP44Q96MT7 982 aa28.12■■■□□ 2.09
SDR39U1-216ENST00000556175 PPEF1O14829 653 aaPredicted RBP28.11■■■□□ 2.09
SDR39U1-216ENST00000556175 CHADLQ6NUI6 762 aa28.11■■■□□ 2.09
SDR39U1-216ENST00000556175 JDP2Q8WYK2 163 aa28.11■■■□□ 2.09
SDR39U1-216ENST00000556175 TMX4Q9H1E5 349 aaPredicted RBP28.11■■■□□ 2.09
SDR39U1-216ENST00000556175 KRT24Q2M2I5 525 aa28.1■■■□□ 2.09
SDR39U1-216ENST00000556175 CALD1Q05682 793 aaKnown RBP28.09■■■□□ 2.09
SDR39U1-216ENST00000556175 CHPF2Q9P2E5 772 aa28.09■■■□□ 2.09
SDR39U1-216ENST00000556175 ZNF541Q9H0D2 1346 aa28.09■■■□□ 2.09
SDR39U1-216ENST00000556175 FZD9O00144 591 aa28.08■■■□□ 2.09
SDR39U1-216ENST00000556175 TCIRG1Q13488 830 aa28.08■■■□□ 2.09
SDR39U1-216ENST00000556175 NLRP10Q86W26 655 aa28.08■■■□□ 2.09
SDR39U1-216ENST00000556175 JMYQ8N9B5 988 aa28.08■■■□□ 2.09
SDR39U1-216ENST00000556175 DBF4Q9UBU7 674 aaPredicted RBP28.08■■■□□ 2.09
SDR39U1-216ENST00000556175 C3orf67Q6ZVT6 689 aa28.07■■■□□ 2.08
SDR39U1-216ENST00000556175 LDHDQ86WU2 507 aa28.06■■■□□ 2.08
SDR39U1-216ENST00000556175 TAF1DQ9H5J8 278 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-216ENST00000556175 HACL1Q9UJ83 578 aa28.06■■■□□ 2.08
SDR39U1-216ENST00000556175 GPC2Q8N158 579 aa28.05■■■□□ 2.08
SDR39U1-216ENST00000556175 PLBD2Q8NHP8 589 aa28.05■■■□□ 2.08
SDR39U1-216ENST00000556175 SH3TC1Q8TE82 1336 aa28.05■■■□□ 2.08
SDR39U1-216ENST00000556175 MBIPQ9NS73 344 aa28.05■■■□□ 2.08
SDR39U1-216ENST00000556175 TRMT112Q9UI30 125 aaKnown RBP28.05■■■□□ 2.08
SDR39U1-216ENST00000556175 EIF6P56537 245 aaKnown RBP28.04■■■□□ 2.08
SDR39U1-216ENST00000556175 IFFO2Q5TF58 517 aa28.04■■■□□ 2.08
SDR39U1-216ENST00000556175 IFT57Q9NWB7 429 aa28.04■■■□□ 2.08
SDR39U1-216ENST00000556175 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
SDR39U1-216ENST00000556175 ABCC4O15439 1325 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 APAF1O14727 1248 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 GNAI1P63096 354 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 DUSP27Q5VZP5 1158 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 LARGE2Q8N3Y3 721 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 ATP6V0A2Q9Y487 856 aa28.03■■■□□ 2.08
SDR39U1-216ENST00000556175 TCERG1O14776 1098 aaKnown RBP28.02■■■□□ 2.08
SDR39U1-216ENST00000556175 ZNF853P0CG23 659 aa28.02■■■□□ 2.08
SDR39U1-216ENST00000556175 POTEIP0CG38 1075 aa28.02■■■□□ 2.08
SDR39U1-216ENST00000556175 POTEJP0CG39 1038 aa28.02■■■□□ 2.08
SDR39U1-216ENST00000556175 ANKRD13DQ6ZTN6 518 aa28.02■■■□□ 2.08
SDR39U1-216ENST00000556175 BBOX1O75936 387 aa28.01■■■□□ 2.07
SDR39U1-216ENST00000556175 PNMA8AQ86V59 439 aaPredicted RBP28.01■■■□□ 2.07
SDR39U1-216ENST00000556175 VPS33BQ9H267 617 aa28.01■■■□□ 2.07
SDR39U1-216ENST00000556175 LAMB2P55268 1798 aa28.01■■■□□ 2.07
SDR39U1-216ENST00000556175 HCLS1P14317 486 aaPredicted RBP28■■■□□ 2.07
SDR39U1-216ENST00000556175 EPHX2P34913 555 aa28■■■□□ 2.07
SDR39U1-216ENST00000556175 EAPPQ56P03 285 aaPredicted RBP28■■■□□ 2.07
SDR39U1-216ENST00000556175 DDX46Q7L014 1031 aaKnown RBP28■■■□□ 2.07
SDR39U1-216ENST00000556175 SUPT20HQ8NEM7 779 aa28■■■□□ 2.07
SDR39U1-216ENST00000556175 CREBZFQ9NS37 354 aa28■■■□□ 2.07
SDR39U1-216ENST00000556175 NIM1KQ8IY84 436 aa27.98■■■□□ 2.07
SDR39U1-216ENST00000556175 CHMP4AQ9BY43 222 aa27.98■■■□□ 2.07
SDR39U1-216ENST00000556175 COL4A5P29400 1685 aa27.97■■■□□ 2.07
SDR39U1-216ENST00000556175 PPIP5K2O43314 1243 aa27.97■■■□□ 2.07
SDR39U1-216ENST00000556175 SP8Q8IXZ3 490 aa27.97■■■□□ 2.07
SDR39U1-216ENST00000556175 ISCA1Q9BUE6 129 aa27.97■■■□□ 2.07
SDR39U1-216ENST00000556175 GJA3Q9Y6H8 435 aa27.97■■■□□ 2.07
SDR39U1-216ENST00000556175 LMOD1P29536 600 aaPredicted RBP27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 GRAPQ13588 217 aa27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 TMC4Q7Z404 712 aa27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 GRAPLQ8TC17 118 aaPredicted RBP27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 CLEC11AQ9Y240 323 aa27.96■■■□□ 2.07
SDR39U1-216ENST00000556175 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
SDR39U1-216ENST00000556175 DPP8Q6V1X1 898 aaPredicted RBP27.95■■■□□ 2.06
SDR39U1-216ENST00000556175 RTFDC1Q9BY42 306 aaPredicted RBP27.95■■■□□ 2.06
SDR39U1-216ENST00000556175 ADAMTSL1Q8N6G6 1762 aa27.95■■■□□ 2.06
SDR39U1-216ENST00000556175 PASKQ96RG2 1323 aa27.94■■■□□ 2.06
SDR39U1-216ENST00000556175 TRIM28Q13263 835 aaKnown RBP27.93■■■□□ 2.06
SDR39U1-216ENST00000556175 SLC51AQ86UW1 340 aa27.93■■■□□ 2.06
SDR39U1-216ENST00000556175 MPNDQ8N594 471 aa27.93■■■□□ 2.06
SDR39U1-216ENST00000556175 DDX60Q8IY21 1712 aaKnown RBP27.92■■■□□ 2.06
SDR39U1-216ENST00000556175 ATP5J2-PTCD1G3V325 749 aa27.92■■■□□ 2.06
SDR39U1-216ENST00000556175 AOC3Q16853 763 aa27.92■■■□□ 2.06
SDR39U1-216ENST00000556175 RIC3Q7Z5B4 369 aa27.92■■■□□ 2.06
SDR39U1-216ENST00000556175 FAM89AQ96GI7 184 aa27.91■■■□□ 2.06
SDR39U1-216ENST00000556175 ZNRF3Q9ULT6 936 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms