RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PDE4DQ08499 809 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 CC2D1BQ5T0F9 858 aaKnown RBP7.83□□□□□ -1.16
PRKCH-220ENST00000556164 SOGA3Q5TF21 947 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 CNTNAP1P78357 1384 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 COL3A1P02461 1466 aaPredicted RBP7.82□□□□□ -1.16
PRKCH-220ENST00000556164 IQCA1LA6NCM1 817 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 FOXN1O15353 648 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 CAMTA2O94983 1202 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 SRGNP10124 158 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 CNGB1Q14028 1251 aaPredicted RBP7.82□□□□□ -1.16
PRKCH-220ENST00000556164 LDHDQ86WU2 507 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
PRKCH-220ENST00000556164 RGS22Q8NE09 1264 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 IL17REQ8NFR9 667 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 AIDAQ96BJ3 306 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 MASTLQ96GX5 879 aa7.82□□□□□ -1.16
PRKCH-220ENST00000556164 KIF7Q2M1P5 1343 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 PASKQ96RG2 1323 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 RAD21O60216 631 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 TRAK2O60296 914 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 PIP4K2AP48426 406 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 CCDC93Q567U6 631 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 KRI1Q8N9T8 703 aaKnown RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 L3MBTL3Q96JM7 780 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 TAF1DQ9H5J8 278 aaPredicted RBP7.81□□□□□ -1.16
PRKCH-220ENST00000556164 ADAMTSL1Q8N6G6 1762 aa7.81□□□□□ -1.16
PRKCH-220ENST00000556164 ZNF541Q9H0D2 1346 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 LAMB4A4D0S4 1761 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 BTBD11A6QL63 1104 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 KCNQ3O43525 872 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 NPR1P16066 1061 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 CTCFP49711 727 aaPredicted RBP7.8□□□□□ -1.16
PRKCH-220ENST00000556164 DDRGK1Q96HY6 314 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 ZNF277Q9NRM2 450 aaPredicted RBP7.8□□□□□ -1.16
PRKCH-220ENST00000556164 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 CEMIPQ8WUJ3 1361 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 NUP98P52948 1817 aa7.8□□□□□ -1.16
PRKCH-220ENST00000556164 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
PRKCH-220ENST00000556164 VEGFBP49765 207 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
PRKCH-220ENST00000556164 OLFM4Q6UX06 510 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 C7orf43Q8WVR3 580 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 PRDM10Q9NQV6 1147 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 HACL1Q9UJ83 578 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 USP16Q9Y5T5 823 aa7.79□□□□□ -1.16
PRKCH-220ENST00000556164 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 PRAMEF22A3QJZ6 481 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 ZNF316A6NFI3 1004 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-220ENST00000556164 PER1O15534 1290 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-220ENST00000556164 ITGBL1O95965 494 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-220ENST00000556164 PRKAR2BP31323 418 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 EPHX2P34913 555 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 LBX1P52954 281 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 MAP1SQ66K74 1059 aaPredicted RBP7.78□□□□□ -1.16
PRKCH-220ENST00000556164 CLEC4GQ6UXB4 293 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 GPIHBP1Q8IV16 184 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 PHACTR3Q96KR7 559 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 GOPCQ9HD26 462 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 NIP7Q9Y221 180 aaKnown RBP eCLIP7.78□□□□□ -1.16
PRKCH-220ENST00000556164 DLG5Q8TDM6 1919 aa7.78□□□□□ -1.16
PRKCH-220ENST00000556164 ABCB7O75027 752 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 SNRPA1P09661 255 aaKnown RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 DSG3P32926 999 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 IARSP41252 1262 aaKnown RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 TPTE2Q6XPS3 522 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 PNMA8AQ86V59 439 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 CNTROBQ8N137 903 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 SYNE4Q8N205 404 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 CCER1Q8TC90 406 aaPredicted RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 RTF1Q92541 710 aaKnown RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 WBP1LQ9NX94 342 aa7.77□□□□□ -1.17
PRKCH-220ENST00000556164 ABT1Q9ULW3 272 aaKnown RBP7.77□□□□□ -1.17
PRKCH-220ENST00000556164 NPC1L1Q9UHC9 1359 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 LTBP1Q14766 1721 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
PRKCH-220ENST00000556164 RASSF10A6NK89 507 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 ALDH1B1P30837 517 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 DEFB115Q30KQ5 88 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 MCM10Q7L590 875 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 GPC2Q8N158 579 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 JDP2Q8WYK2 163 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 CFAP53Q96M91 514 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 GJA3Q9Y6H8 435 aa7.76□□□□□ -1.17
PRKCH-220ENST00000556164 WDR33Q9C0J8 1336 aaKnown RBP7.76□□□□□ -1.17
PRKCH-220ENST00000556164 ABCC12Q96J65 1359 aa7.75□□□□□ -1.17
PRKCH-220ENST00000556164 THSD7BQ9C0I4 1608 aa7.75□□□□□ -1.17
PRKCH-220ENST00000556164 KDM3BQ7LBC6 1761 aa7.75□□□□□ -1.17
PRKCH-220ENST00000556164 NBPF26B4DH59 902 aa7.75□□□□□ -1.17
PRKCH-220ENST00000556164 FZD9O00144 591 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms