RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 NLGN1Q8N2Q7 840 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
CHD8-210ENST00000555962 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 ANKRD31Q8N7Z5 1873 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 ZBED9Q6R2W3 1325 aa11.57□□□□□ -0.56
CHD8-210ENST00000555962 MMP10P09238 476 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 POLD1P28340 1107 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 TM4SF1P30408 202 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 DDR1Q08345 913 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 HLFQ16534 295 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 COPS6Q7L5N1 327 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 XAGE3Q8WTP9 111 aa11.56□□□□□ -0.56
CHD8-210ENST00000555962 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
CHD8-210ENST00000555962 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
CHD8-210ENST00000555962 AIMP1Q12904 312 aaKnown RBP11.55□□□□□ -0.56
CHD8-210ENST00000555962 NFIXQ14938 502 aa11.55□□□□□ -0.56
CHD8-210ENST00000555962 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
CHD8-210ENST00000555962 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
CHD8-210ENST00000555962 MAP3K15Q6ZN16 1313 aa11.55□□□□□ -0.56
CHD8-210ENST00000555962 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
CHD8-210ENST00000555962 KIF6Q6ZMV9 814 aa11.54□□□□□ -0.56
CHD8-210ENST00000555962 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
CHD8-210ENST00000555962 G2E3Q7L622 706 aa11.54□□□□□ -0.56
CHD8-210ENST00000555962 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
CHD8-210ENST00000555962 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
CHD8-210ENST00000555962 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
CHD8-210ENST00000555962 ERVV-1B6SEH8 477 aa11.53□□□□□ -0.56
CHD8-210ENST00000555962 CLEC4GQ6UXB4 293 aa11.53□□□□□ -0.56
CHD8-210ENST00000555962 PPP1R1BQ9UD71 204 aaPredicted RBP11.53□□□□□ -0.56
CHD8-210ENST00000555962 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
CHD8-210ENST00000555962 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
CHD8-210ENST00000555962 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
CHD8-210ENST00000555962 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
CHD8-210ENST00000555962 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
CHD8-210ENST00000555962 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
CHD8-210ENST00000555962 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.57
CHD8-210ENST00000555962 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
CHD8-210ENST00000555962 PLBD2Q8NHP8 589 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 ZNF652Q9Y2D9 606 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 LAMB2P55268 1798 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 C10orf71Q711Q0 1435 aa11.51□□□□□ -0.57
CHD8-210ENST00000555962 TNRC6CQ9HCJ0 1690 aaKnown RBP11.5□□□□□ -0.57
CHD8-210ENST00000555962 SERPINB2P05120 415 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 GPTP24298 496 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 ZNF34Q8IZ26 560 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 SETDB2Q96T68 719 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 NIP7Q9Y221 180 aaKnown RBP eCLIP11.5□□□□□ -0.576e-20■■■□□ 16.1
CHD8-210ENST00000555962 UBN2Q6ZU65 1347 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 ADCY9O60503 1353 aa11.5□□□□□ -0.57
CHD8-210ENST00000555962 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
CHD8-210ENST00000555962 FLIIQ13045 1269 aa11.49□□□□□ -0.57
CHD8-210ENST00000555962 PRR5LQ6MZQ0 368 aa11.49□□□□□ -0.57
CHD8-210ENST00000555962 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
CHD8-210ENST00000555962 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
CHD8-210ENST00000555962 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
CHD8-210ENST00000555962 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
CHD8-210ENST00000555962 PI4KAP2A4QPH2 592 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 FAM177BA6PVY3 158 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 ERICH6Q7L0X2 663 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 RIC3Q7Z5B4 369 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 PI4KAP1Q8N8J0 262 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
CHD8-210ENST00000555962 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
CHD8-210ENST00000555962 MYH3P11055 1940 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 TAF1P21675 1872 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 PXDNLA1KZ92 1463 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 ATP5J2-PTCD1G3V325 749 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 SEMA3EO15041 775 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
CHD8-210ENST00000555962 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
CHD8-210ENST00000555962 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 ISCA1Q9BUE6 129 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 MAP3K2Q9Y2U5 619 aa11.47□□□□□ -0.57
CHD8-210ENST00000555962 GOLGB1Q14789 3259 aaKnown RBP11.47□□□□□ -0.57
CHD8-210ENST00000555962 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 NTSR2O95665 410 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 PDE4AP27815 886 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 RARSP54136 660 aaKnown RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 CNBD1Q8NA66 436 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 ZC3H15Q8WU90 426 aaKnown RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 MYD88Q99836 296 aa11.46□□□□□ -0.57
CHD8-210ENST00000555962 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 METTL22Q9BUU2 404 aaPredicted RBP11.46□□□□□ -0.57
CHD8-210ENST00000555962 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.58
CHD8-210ENST00000555962 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms