RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 KIF3CO14782 793 aa12.97□□□□□ -0.33
HNRNPC-219ENST00000555309 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-219ENST00000555309 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
HNRNPC-219ENST00000555309 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 HOXB7P09629 217 aa12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 NPR1P16066 1061 aa12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-219ENST00000555309 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 TCIRG1Q13488 830 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 CCDC27Q2M243 656 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 POTEDQ86YR6 584 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 NYXQ9GZU5 481 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.34
HNRNPC-219ENST00000555309 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
HNRNPC-219ENST00000555309 LMNB1P20700 586 aa12.95□□□□□ -0.34
HNRNPC-219ENST00000555309 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-219ENST00000555309 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
HNRNPC-219ENST00000555309 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-219ENST00000555309 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-219ENST00000555309 PLBD2Q8NHP8 589 aa12.94□□□□□ -0.34
HNRNPC-219ENST00000555309 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
HNRNPC-219ENST00000555309 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 G2E3Q7L622 706 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 PPP1R42Q7Z4L9 355 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 HYPKQ9NX55 129 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-219ENST00000555309 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
HNRNPC-219ENST00000555309 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
HNRNPC-219ENST00000555309 TAOK3Q9H2K8 898 aa12.92□□□□□ -0.34
HNRNPC-219ENST00000555309 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-219ENST00000555309 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-219ENST00000555309 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 MYD88Q99836 296 aa12.91□□□□□ -0.34
HNRNPC-219ENST00000555309 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
HNRNPC-219ENST00000555309 POTECB2RU33 542 aa12.9□□□□□ -0.34
HNRNPC-219ENST00000555309 CCDC30Q5VVM6 783 aa12.9□□□□□ -0.34
HNRNPC-219ENST00000555309 TAF1P21675 1872 aa12.9□□□□□ -0.34
HNRNPC-219ENST00000555309 SNED1Q8TER0 1413 aa12.9□□□□□ -0.35
HNRNPC-219ENST00000555309 COL4A1P02462 1669 aa12.9□□□□□ -0.35
HNRNPC-219ENST00000555309 IL16Q14005 1332 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 RBM17Q96I25 401 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 CRAMP1Q96RY5 1269 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 ABCC4O15439 1325 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
HNRNPC-219ENST00000555309 VAMP4O75379 141 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 DDNO94850 711 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 LAMB2P55268 1798 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 PI4KAP2A4QPH2 592 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 PPEF1O14829 653 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 PI4KAP1Q8N8J0 262 aa12.88□□□□□ -0.35
HNRNPC-219ENST00000555309 KDM2BQ8NHM5 1336 aa12.87□□□□□ -0.35
HNRNPC-219ENST00000555309 COL4A5P29400 1685 aa12.87□□□□□ -0.35
HNRNPC-219ENST00000555309 IGKV5-2P06315 115 aa12.87□□□□□ -0.35
HNRNPC-219ENST00000555309 TOMM70O94826 608 aa12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 CCDC85AQ96PX6 553 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 METTL22Q9BUU2 404 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 DDX60Q8IY21 1712 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 DICER1Q9UPY3 1922 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-219ENST00000555309 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 KSR2Q6VAB6 950 aa12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 HTRA3P83110 453 aa12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 STK31Q9BXU1 1019 aa12.85□□□□□ -0.35
HNRNPC-219ENST00000555309 SEC31BQ9NQW1 1179 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms