RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 TBC1D9BQ66K14 1250 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 MSL1Q68DK7 614 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
MARK3-207ENST00000553942 SLC51AQ86UW1 340 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 BACH2Q9BYV9 841 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 BICC1Q9H694 974 aaKnown RBP11.4□□□□□ -0.58
MARK3-207ENST00000553942 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
MARK3-207ENST00000553942 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.59
MARK3-207ENST00000553942 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
MARK3-207ENST00000553942 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
MARK3-207ENST00000553942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
MARK3-207ENST00000553942 ATP10DQ9P241 1426 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 GNAI2P04899 355 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 HCLS1P14317 486 aaPredicted RBP11.39□□□□□ -0.59
MARK3-207ENST00000553942 PDE4AP27815 886 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 PPP1R42Q7Z4L9 355 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 CHMP3Q9Y3E7 222 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 LY75O60449 1722 aa11.39□□□□□ -0.59
MARK3-207ENST00000553942 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
MARK3-207ENST00000553942 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 NLRP10Q86W26 655 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
MARK3-207ENST00000553942 SIL1Q9H173 461 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 CACNA1FO60840 1977 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 ILDR2Q71H61 639 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
MARK3-207ENST00000553942 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
MARK3-207ENST00000553942 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 RFC4P35249 363 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 TRAPPC3LQ5T215 181 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 CWC25Q9NXE8 425 aaPredicted RBP11.37□□□□□ -0.59
MARK3-207ENST00000553942 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
MARK3-207ENST00000553942 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 PLSCR1O15162 318 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 CASP7P55210 303 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
MARK3-207ENST00000553942 COL23A1Q86Y22 540 aaPredicted RBP11.37□□□□□ -0.59
MARK3-207ENST00000553942 OTUD7AQ8TE49 926 aaPredicted RBP11.37□□□□□ -0.59
MARK3-207ENST00000553942 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
MARK3-207ENST00000553942 TSHZ3Q63HK5 1081 aa11.36□□□□□ -0.59
MARK3-207ENST00000553942 ANKRD44Q8N8A2 993 aa11.36□□□□□ -0.59
MARK3-207ENST00000553942 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
MARK3-207ENST00000553942 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
MARK3-207ENST00000553942 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
MARK3-207ENST00000553942 ZPR1O75312 459 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 ALDH1L1O75891 902 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 GNAI3P08754 354 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 IL1RAPL2Q9NP60 686 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 NUP98P52948 1817 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 AAMPQ13685 434 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 ZNF34Q8IZ26 560 aa11.35□□□□□ -0.59
MARK3-207ENST00000553942 RRAGDQ9NQL2 400 aaPredicted RBP11.35□□□□□ -0.59
MARK3-207ENST00000553942 FGD1P98174 961 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 SF3B2Q13435 895 aaKnown RBP11.34□□□□□ -0.59
MARK3-207ENST00000553942 RWDD1Q9H446 243 aaPredicted RBP11.34□□□□□ -0.59
MARK3-207ENST00000553942 NARFQ9UHQ1 456 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 PXDNLA1KZ92 1463 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 H7C1W4 665 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 FOXO4P98177 505 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 ERFEQ4G0M1 354 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 SLC27A3Q5K4L6 730 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
MARK3-207ENST00000553942 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
MARK3-207ENST00000553942 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 GYS1P13807 737 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 ATP8B2P98198 1209 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 NFIXQ14938 502 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 IRS4O14654 1257 aaPredicted RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 CLCN1P35523 988 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
MARK3-207ENST00000553942 SEC31BQ9NQW1 1179 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.6
MARK3-207ENST00000553942 WTIPA6NIX2 430 aaPredicted RBP11.32□□□□□ -0.6
MARK3-207ENST00000553942 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
MARK3-207ENST00000553942 SNAP23O00161 211 aa11.32□□□□□ -0.6
MARK3-207ENST00000553942 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
MARK3-207ENST00000553942 GREM2Q9H772 168 aa11.32□□□□□ -0.6
MARK3-207ENST00000553942 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
MARK3-207ENST00000553942 NTSR2O95665 410 aa11.32□□□□□ -0.6
MARK3-207ENST00000553942 BAG6P46379 1132 aa11.32□□□□□ -0.6
MARK3-207ENST00000553942 COL4A1P02462 1669 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms