RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 DDX21Q9NR30 783 aaKnown RBP eCLIP22.89■■□□□ 1.26
SDR39U1-206ENST00000553930 AIMP1Q12904 312 aaKnown RBP22.88■■□□□ 1.25
SDR39U1-206ENST00000553930 XAGE3Q8WTP9 111 aa22.88■■□□□ 1.25
SDR39U1-206ENST00000553930 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
SDR39U1-206ENST00000553930 ZNF277Q9NRM2 450 aaPredicted RBP22.88■■□□□ 1.25
SDR39U1-206ENST00000553930 DDNO94850 711 aaPredicted RBP22.87■■□□□ 1.25
SDR39U1-206ENST00000553930 HOXB7P09629 217 aa22.87■■□□□ 1.25
SDR39U1-206ENST00000553930 HSP90AB3PQ58FF7 597 aa22.87■■□□□ 1.25
SDR39U1-206ENST00000553930 UTP14AQ9BVJ6 771 aaKnown RBP22.87■■□□□ 1.25
SDR39U1-206ENST00000553930 CC2D2BQ6DHV5 1058 aa22.86■■□□□ 1.25
SDR39U1-206ENST00000553930 RBM17Q96I25 401 aaKnown RBP22.86■■□□□ 1.25
SDR39U1-206ENST00000553930 HDGFL1Q5TGJ6 251 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 SYNE4Q8N205 404 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 NLRP3Q96P20 1036 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 CRAMP1Q96RY5 1269 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 PSMD1Q99460 953 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 CHPF2Q9P2E5 772 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 RNF123Q5XPI4 1314 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 SNED1Q8TER0 1413 aa22.85■■□□□ 1.25
SDR39U1-206ENST00000553930 APAF1O14727 1248 aa22.84■■□□□ 1.25
SDR39U1-206ENST00000553930 IARSP41252 1262 aaKnown RBP22.84■■□□□ 1.25
SDR39U1-206ENST00000553930 HTRA3P83110 453 aa22.84■■□□□ 1.25
SDR39U1-206ENST00000553930 SLC10A5Q5PT55 438 aa22.84■■□□□ 1.25
SDR39U1-206ENST00000553930 TCIRG1Q13488 830 aa22.83■■□□□ 1.25
SDR39U1-206ENST00000553930 GRIPAP1Q4V328 841 aa22.83■■□□□ 1.25
SDR39U1-206ENST00000553930 C3orf67Q6ZVT6 689 aa22.83■■□□□ 1.25
SDR39U1-206ENST00000553930 MBIPQ9NS73 344 aa22.83■■□□□ 1.25
SDR39U1-206ENST00000553930 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 L3MBTL3Q96JM7 780 aaPredicted RBP22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 DBF4Q9UBU7 674 aaPredicted RBP22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 IQCA1LA6NCM1 817 aa22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 PPEF1O14829 653 aaPredicted RBP22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
SDR39U1-206ENST00000553930 ZNF541Q9H0D2 1346 aa22.81■■□□□ 1.24
SDR39U1-206ENST00000553930 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
SDR39U1-206ENST00000553930 KLRG1Q96E93 195 aa22.81■■□□□ 1.24
SDR39U1-206ENST00000553930 IFT57Q9NWB7 429 aa22.81■■□□□ 1.24
SDR39U1-206ENST00000553930 FZD9O00144 591 aa22.8■■□□□ 1.24
SDR39U1-206ENST00000553930 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
SDR39U1-206ENST00000553930 TRMT112Q9UI30 125 aaKnown RBP22.8■■□□□ 1.24
SDR39U1-206ENST00000553930 PCNTO95613 3336 aa22.79■■□□□ 1.24
SDR39U1-206ENST00000553930 GNAI1P63096 354 aa22.79■■□□□ 1.24
SDR39U1-206ENST00000553930 ANKRD13DQ6ZTN6 518 aa22.79■■□□□ 1.24
SDR39U1-206ENST00000553930 JDP2Q8WYK2 163 aa22.79■■□□□ 1.24
SDR39U1-206ENST00000553930 HYPKQ9NX55 129 aa22.79■■□□□ 1.24
SDR39U1-206ENST00000553930 CHADLQ6NUI6 762 aa22.78■■□□□ 1.24
SDR39U1-206ENST00000553930 ABCC4O15439 1325 aa22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 ANKRD36CQ5JPF3 1778 aa22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 TCERG1O14776 1098 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 ATP6V0A2Q9Y487 856 aa22.77■■□□□ 1.24
SDR39U1-206ENST00000553930 POTEIP0CG38 1075 aa22.76■■□□□ 1.23
SDR39U1-206ENST00000553930 POTEJP0CG39 1038 aa22.76■■□□□ 1.23
SDR39U1-206ENST00000553930 SLC51AQ86UW1 340 aa22.76■■□□□ 1.23
SDR39U1-206ENST00000553930 LDHDQ86WU2 507 aa22.75■■□□□ 1.23
SDR39U1-206ENST00000553930 GPC2Q8N158 579 aa22.75■■□□□ 1.23
SDR39U1-206ENST00000553930 ISCA1Q9BUE6 129 aa22.75■■□□□ 1.23
SDR39U1-206ENST00000553930 BBOX1O75936 387 aa22.74■■□□□ 1.23
SDR39U1-206ENST00000553930 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
SDR39U1-206ENST00000553930 JMYQ8N9B5 988 aa22.74■■□□□ 1.23
SDR39U1-206ENST00000553930 HACL1Q9UJ83 578 aa22.74■■□□□ 1.23
SDR39U1-206ENST00000553930 EIF6P56537 245 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-206ENST00000553930 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
SDR39U1-206ENST00000553930 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-206ENST00000553930 SCN4AP35499 1836 aa22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 COL4A5P29400 1685 aa22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 VPS33BQ9H267 617 aa22.72■■□□□ 1.23
SDR39U1-206ENST00000553930 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
SDR39U1-206ENST00000553930 PPIP5K2O43314 1243 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 EPHX2P34913 555 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 GOLGA2Q08379 1002 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 TRIM28Q13263 835 aaKnown RBP22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 GRAPQ13588 217 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 C8orf58Q8NAV2 365 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 SUPT20HQ8NEM7 779 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 GRAPLQ8TC17 118 aaPredicted RBP22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 FAM89AQ96GI7 184 aa22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 RTFDC1Q9BY42 306 aaPredicted RBP22.7■■□□□ 1.22
SDR39U1-206ENST00000553930 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 NIM1KQ8IY84 436 aa22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 CHMP4AQ9BY43 222 aa22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 PHAXQ9H814 394 aaKnown RBP22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 GJA3Q9Y6H8 435 aa22.69■■□□□ 1.22
SDR39U1-206ENST00000553930 AOC3Q16853 763 aa22.68■■□□□ 1.22
SDR39U1-206ENST00000553930 DPP8Q6V1X1 898 aaPredicted RBP22.68■■□□□ 1.22
SDR39U1-206ENST00000553930 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
SDR39U1-206ENST00000553930 LAMB2P55268 1798 aa22.67■■□□□ 1.22
SDR39U1-206ENST00000553930 SF3B3Q15393 1217 aaKnown RBP22.67■■□□□ 1.22
SDR39U1-206ENST00000553930 CCDC27Q2M243 656 aa22.67■■□□□ 1.22
SDR39U1-206ENST00000553930 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms