RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 SIRT2Q8IXJ6 389 aa14.71□□□□□ -0.05
NEK9-202ENST00000553823 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
NEK9-202ENST00000553823 C4AP0C0L4 1744 aa14.71□□□□□ -0.05
NEK9-202ENST00000553823 SCN7AQ01118 1682 aa14.71□□□□□ -0.06
NEK9-202ENST00000553823 H7C1W4 665 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 ZPR1O75312 459 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 SSFA2P28290 1259 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 BAG6P46379 1132 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
NEK9-202ENST00000553823 NLRP10Q86W26 655 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 AMIGO3Q86WK7 504 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
NEK9-202ENST00000553823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.69□□□□□ -0.06
NEK9-202ENST00000553823 HMMRO75330 724 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 PHF14O94880 888 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 RFC4P35249 363 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 CASP7P55210 303 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 ATP8B2P98198 1209 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 SUCLG2Q96I99 432 aa14.69□□□□□ -0.06
NEK9-202ENST00000553823 CAPN15O75808 1086 aa14.68□□□□□ -0.06
NEK9-202ENST00000553823 EZH2Q15910 746 aaKnown RBP14.68□□□□□ -0.06
NEK9-202ENST00000553823 PARP10Q53GL7 1025 aa14.68□□□□□ -0.06
NEK9-202ENST00000553823 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
NEK9-202ENST00000553823 JARID2Q92833 1246 aaPredicted RBP14.68□□□□□ -0.06
NEK9-202ENST00000553823 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
NEK9-202ENST00000553823 SRP68Q9UHB9 627 aaKnown RBP14.68□□□□□ -0.06
NEK9-202ENST00000553823 NIP7Q9Y221 180 aaKnown RBP eCLIP14.68□□□□□ -0.06
NEK9-202ENST00000553823 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
NEK9-202ENST00000553823 TUBGCP6Q96RT7 1819 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
NEK9-202ENST00000553823 ZNF827Q17R98 1081 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 ZBTB38Q8NAP3 1195 aaPredicted RBP14.67□□□□□ -0.06
NEK9-202ENST00000553823 KAZALD1Q96I82 304 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 BCL2L12Q9HB09 334 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 TFCP2L1Q9NZI6 479 aa14.67□□□□□ -0.06
NEK9-202ENST00000553823 MTX1Q13505 466 aa14.66□□□□□ -0.06
NEK9-202ENST00000553823 RTL5Q5HYW3 569 aaPredicted RBP14.66□□□□□ -0.06
NEK9-202ENST00000553823 PPP1R42Q7Z4L9 355 aa14.66□□□□□ -0.06
NEK9-202ENST00000553823 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
NEK9-202ENST00000553823 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
NEK9-202ENST00000553823 MYH3P11055 1940 aa14.66□□□□□ -0.06
NEK9-202ENST00000553823 PNMA6EA0A0J9YXQ4 647 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 DEFB132Q7Z7B7 95 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 FLAD1Q8NFF5 587 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 GCC1Q96CN9 775 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 FAM89AQ96GI7 184 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 UTP14AQ9BVJ6 771 aaKnown RBP14.65□□□□□ -0.06
NEK9-202ENST00000553823 TRMT112Q9UI30 125 aaKnown RBP14.65□□□□□ -0.06
NEK9-202ENST00000553823 CDHR2Q9BYE9 1310 aa14.65□□□□□ -0.06
NEK9-202ENST00000553823 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 POLA2Q14181 598 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 RABL6Q3YEC7 729 aaPredicted RBP14.64□□□□□ -0.07
NEK9-202ENST00000553823 EPHA10Q5JZY3 1008 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 SUSD4Q5VX71 490 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 TBC1D9BQ66K14 1250 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 PLA2G12BQ9BX93 195 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 DCTPP1Q9H773 170 aa14.64□□□□□ -0.07
NEK9-202ENST00000553823 FOXO4P98177 505 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 BICDL1Q6ZP65 573 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 SETDB2Q96T68 719 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 SH3TC1Q8TE82 1336 aa14.63□□□□□ -0.07
NEK9-202ENST00000553823 FAM177BA6PVY3 158 aa14.62□□□□□ -0.07
NEK9-202ENST00000553823 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
NEK9-202ENST00000553823 NTSR2O95665 410 aa14.62□□□□□ -0.07
NEK9-202ENST00000553823 GYS1P13807 737 aa14.62□□□□□ -0.07
NEK9-202ENST00000553823 QSER1Q2KHR3 1735 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
NEK9-202ENST00000553823 SLC15A2Q16348 729 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 LMBR1LQ6UX01 489 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
NEK9-202ENST00000553823 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
NEK9-202ENST00000553823 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 PNPLA7Q6ZV29 1317 aa14.61□□□□□ -0.07
NEK9-202ENST00000553823 LAMB2P55268 1798 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 PDE8AO60658 829 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 DSG3P32926 999 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 NUCB1Q02818 461 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 NFIXQ14938 502 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 NYXQ9GZU5 481 aa14.6□□□□□ -0.07
NEK9-202ENST00000553823 DDX60Q8IY21 1712 aaKnown RBP14.59□□□□□ -0.07
NEK9-202ENST00000553823 SURF6O75683 361 aaKnown RBP14.59□□□□□ -0.07
NEK9-202ENST00000553823 ANKRD45Q5TZF3 282 aa14.59□□□□□ -0.07
NEK9-202ENST00000553823 NBPF5PQ86XG9 351 aaPredicted RBP14.59□□□□□ -0.07
NEK9-202ENST00000553823 EXOC6BQ9Y2D4 811 aa14.59□□□□□ -0.07
NEK9-202ENST00000553823 CHMP3Q9Y3E7 222 aa14.59□□□□□ -0.07
NEK9-202ENST00000553823 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
NEK9-202ENST00000553823 CSF1RP07333 972 aa14.58□□□□□ -0.08
NEK9-202ENST00000553823 GTF2E1P29083 439 aaPredicted RBP14.58□□□□□ -0.08
NEK9-202ENST00000553823 CTSWP56202 376 aa14.58□□□□□ -0.08
NEK9-202ENST00000553823 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
NEK9-202ENST00000553823 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
NEK9-202ENST00000553823 CHD1LQ86WJ1 897 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms