RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
RDH11-205ENST00000553816 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
RDH11-205ENST00000553816 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
RDH11-205ENST00000553816 CHL1O00533 1208 aa10.74□□□□□ -0.69
RDH11-205ENST00000553816 MMP10P09238 476 aa10.74□□□□□ -0.69
RDH11-205ENST00000553816 IL6STP40189 918 aaPredicted RBP10.74□□□□□ -0.69
RDH11-205ENST00000553816 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
RDH11-205ENST00000553816 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
RDH11-205ENST00000553816 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
RDH11-205ENST00000553816 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
RDH11-205ENST00000553816 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
RDH11-205ENST00000553816 TM4SF1P30408 202 aa10.73□□□□□ -0.69
RDH11-205ENST00000553816 DDR1Q08345 913 aa10.73□□□□□ -0.69
RDH11-205ENST00000553816 NLGN1Q8N2Q7 840 aa10.73□□□□□ -0.69
RDH11-205ENST00000553816 BABAM1Q9NWV8 329 aa10.73□□□□□ -0.69
RDH11-205ENST00000553816 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
RDH11-205ENST00000553816 ANKRD31Q8N7Z5 1873 aa10.72□□□□□ -0.69
RDH11-205ENST00000553816 ZPR1O75312 459 aa10.72□□□□□ -0.69
RDH11-205ENST00000553816 CAMTA2O94983 1202 aa10.72□□□□□ -0.69
RDH11-205ENST00000553816 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
RDH11-205ENST00000553816 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
RDH11-205ENST00000553816 ANXA1P04083 346 aa10.71□□□□□ -0.69
RDH11-205ENST00000553816 EIF2S2P20042 333 aaKnown RBP10.71□□□□□ -0.69
RDH11-205ENST00000553816 NFIXQ14938 502 aa10.71□□□□□ -0.69
RDH11-205ENST00000553816 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
RDH11-205ENST00000553816 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
RDH11-205ENST00000553816 ANKRD36CQ5JPF3 1778 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 POLRMTO00411 1230 aaKnown RBP10.7□□□□□ -0.7
RDH11-205ENST00000553816 PDIA6Q15084 440 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 CCDC27Q2M243 656 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
RDH11-205ENST00000553816 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 PARP3Q9Y6F1 533 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 CACNA1SQ13698 1873 aa10.7□□□□□ -0.7
RDH11-205ENST00000553816 CHD4Q14839 1912 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 A0A087WZG4 1122 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 MYL6BP14649 208 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 HLFQ16534 295 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 DIEXFQ68CQ4 756 aaKnown RBP10.69□□□□□ -0.7
RDH11-205ENST00000553816 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 TTLL7Q6ZT98 887 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
RDH11-205ENST00000553816 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 DLEC1Q9Y238 1755 aa10.69□□□□□ -0.7
RDH11-205ENST00000553816 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
RDH11-205ENST00000553816 CARMIL3Q8ND23 1372 aa10.68□□□□□ -0.7
RDH11-205ENST00000553816 COL11A2P13942 1736 aaPredicted RBP10.68□□□□□ -0.7
RDH11-205ENST00000553816 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
RDH11-205ENST00000553816 GNAI1P63096 354 aa10.68□□□□□ -0.7
RDH11-205ENST00000553816 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
RDH11-205ENST00000553816 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
RDH11-205ENST00000553816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.67□□□□□ -0.7
RDH11-205ENST00000553816 SERPINB2P05120 415 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 YBX3P16989 372 aaKnown RBP eCLIP10.67□□□□□ -0.78e-7■■□□□ 12.2
RDH11-205ENST00000553816 DUSP27Q5VZP5 1158 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 CCDC24Q8N4L8 307 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 TSPYL6Q8N831 410 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
RDH11-205ENST00000553816 UTRNP46939 3433 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 ARFGEF2Q9Y6D5 1785 aa10.67□□□□□ -0.7
RDH11-205ENST00000553816 ARFGEF1Q9Y6D6 1849 aa10.66□□□□□ -0.7
RDH11-205ENST00000553816 A0A0G2JLW4 131 aa10.66□□□□□ -0.7
RDH11-205ENST00000553816 CCER2I3L3R5 266 aa10.66□□□□□ -0.7
RDH11-205ENST00000553816 KCNA3P22001 575 aa10.66□□□□□ -0.7
RDH11-205ENST00000553816 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
RDH11-205ENST00000553816 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
RDH11-205ENST00000553816 CHPF2Q9P2E5 772 aa10.66□□□□□ -0.7
RDH11-205ENST00000553816 ERBB4Q15303 1308 aa10.65□□□□□ -0.7
RDH11-205ENST00000553816 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
RDH11-205ENST00000553816 DPEP1P16444 411 aa10.65□□□□□ -0.7
RDH11-205ENST00000553816 CHRNA5P30532 468 aa10.65□□□□□ -0.7
RDH11-205ENST00000553816 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
RDH11-205ENST00000553816 ZBTB3Q9H5J0 574 aa10.65□□□□□ -0.7
RDH11-205ENST00000553816 TNRC6CQ9HCJ0 1690 aaKnown RBP10.65□□□□□ -0.7
RDH11-205ENST00000553816 IL16Q14005 1332 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 HOXB7P09629 217 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 TGFB2P61812 414 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
RDH11-205ENST00000553816 GPR162Q16538 588 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 HDGFL1Q5TGJ6 251 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 PRR5LQ6MZQ0 368 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 CLEC4GQ6UXB4 293 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 XAGE3Q8WTP9 111 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 DDX21Q9NR30 783 aaKnown RBP eCLIP10.64□□□□□ -0.71
RDH11-205ENST00000553816 LAMB2P55268 1798 aa10.64□□□□□ -0.71
RDH11-205ENST00000553816 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 ERVV-1B6SEH8 477 aa10.63□□□□□ -0.71
RDH11-205ENST00000553816 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
RDH11-205ENST00000553816 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
RDH11-205ENST00000553816 WDR63Q8IWG1 891 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms