RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
ACTN1-208ENST00000553370 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
ACTN1-208ENST00000553370 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-208ENST00000553370 MYL6BP14649 208 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTN1-208ENST00000553370 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-208ENST00000553370 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
ACTN1-208ENST00000553370 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-208ENST00000553370 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
ACTN1-208ENST00000553370 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
ACTN1-208ENST00000553370 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
ACTN1-208ENST00000553370 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-208ENST00000553370 GPTP24298 496 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 HLFQ16534 295 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
ACTN1-208ENST00000553370 LAMB2P55268 1798 aa13.03□□□□□ -0.32
ACTN1-208ENST00000553370 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
ACTN1-208ENST00000553370 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
ACTN1-208ENST00000553370 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
ACTN1-208ENST00000553370 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
ACTN1-208ENST00000553370 THUMPD2Q9BTF0 503 aaKnown RBP13.03□□□□□ -0.32
ACTN1-208ENST00000553370 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
ACTN1-208ENST00000553370 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
ACTN1-208ENST00000553370 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
ACTN1-208ENST00000553370 POTECB2RU33 542 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
ACTN1-208ENST00000553370 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 ABCC12Q96J65 1359 aa13.02□□□□□ -0.33
ACTN1-208ENST00000553370 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
ACTN1-208ENST00000553370 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
ACTN1-208ENST00000553370 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-208ENST00000553370 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
ACTN1-208ENST00000553370 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
ACTN1-208ENST00000553370 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-208ENST00000553370 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
ACTN1-208ENST00000553370 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
ACTN1-208ENST00000553370 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 POTEIP0CG38 1075 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 POTEJP0CG39 1038 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 AIDAQ96BJ3 306 aa13□□□□□ -0.33
ACTN1-208ENST00000553370 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
ACTN1-208ENST00000553370 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-208ENST00000553370 EPHX2P34913 555 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 C7orf43Q8WVR3 580 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 TAF1P21675 1872 aa12.99□□□□□ -0.33
ACTN1-208ENST00000553370 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-208ENST00000553370 NUBP1P53384 320 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 RIPK4P57078 832 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-208ENST00000553370 GPC2Q8N158 579 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-208ENST00000553370 PSMD1Q99460 953 aa12.98□□□□□ -0.33
ACTN1-208ENST00000553370 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 NLRP3Q96P20 1036 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
ACTN1-208ENST00000553370 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
ACTN1-208ENST00000553370 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN1-208ENST00000553370 RALBP1Q15311 655 aa12.96□□□□□ -0.33
ACTN1-208ENST00000553370 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
ACTN1-208ENST00000553370 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
ACTN1-208ENST00000553370 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
ACTN1-208ENST00000553370 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
ACTN1-208ENST00000553370 ABT1Q9ULW3 272 aaKnown RBP12.96□□□□□ -0.33
ACTN1-208ENST00000553370 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
ACTN1-208ENST00000553370 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
ACTN1-208ENST00000553370 NTSR2O95665 410 aa12.95□□□□□ -0.34
ACTN1-208ENST00000553370 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
ACTN1-208ENST00000553370 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
ACTN1-208ENST00000553370 FZD9O00144 591 aa12.94□□□□□ -0.34
ACTN1-208ENST00000553370 ANXA1P04083 346 aa12.94□□□□□ -0.34
ACTN1-208ENST00000553370 NBR1Q14596 966 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms