RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
HNRNPC-205ENST00000553300 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
HNRNPC-205ENST00000553300 FER1L6Q2WGJ9 1857 aa17■□□□□ 0.31
HNRNPC-205ENST00000553300 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
HNRNPC-205ENST00000553300 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
HNRNPC-205ENST00000553300 NLRP3Q96P20 1036 aa17■□□□□ 0.31
HNRNPC-205ENST00000553300 ABCC12Q96J65 1359 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 NLRP10Q86W26 655 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 RBM17Q96I25 401 aaKnown RBP16.99■□□□□ 0.31
HNRNPC-205ENST00000553300 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 KIF3CO14782 793 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 WDR63Q8IWG1 891 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 CRAMP1Q96RY5 1269 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 ANKRD36CQ5JPF3 1778 aa16.98■□□□□ 0.31
HNRNPC-205ENST00000553300 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
HNRNPC-205ENST00000553300 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-205ENST00000553300 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
HNRNPC-205ENST00000553300 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-205ENST00000553300 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
HNRNPC-205ENST00000553300 GLTPD2A6NH11 291 aa16.96■□□□□ 0.31
HNRNPC-205ENST00000553300 PRELPP51888 382 aa16.96■□□□□ 0.31
HNRNPC-205ENST00000553300 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
HNRNPC-205ENST00000553300 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 TOMM70O94826 608 aa16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 TNRC6CQ9HCJ0 1690 aaKnown RBP16.95■□□□□ 0.3
HNRNPC-205ENST00000553300 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
HNRNPC-205ENST00000553300 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
HNRNPC-205ENST00000553300 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
HNRNPC-205ENST00000553300 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
HNRNPC-205ENST00000553300 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
HNRNPC-205ENST00000553300 C16orf71Q8IYS4 520 aaPredicted RBP16.93■□□□□ 0.3
HNRNPC-205ENST00000553300 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
HNRNPC-205ENST00000553300 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
HNRNPC-205ENST00000553300 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
HNRNPC-205ENST00000553300 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
HNRNPC-205ENST00000553300 PSMD1Q99460 953 aa16.92■□□□□ 0.3
HNRNPC-205ENST00000553300 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 BBOX1O75936 387 aa16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
HNRNPC-205ENST00000553300 PPEF1O14829 653 aaPredicted RBP16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 C3orf67Q6ZVT6 689 aa16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
HNRNPC-205ENST00000553300 TMC4Q7Z404 712 aa16.89■□□□□ 0.3
HNRNPC-205ENST00000553300 SYNE4Q8N205 404 aa16.89■□□□□ 0.3
HNRNPC-205ENST00000553300 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.3
HNRNPC-205ENST00000553300 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
HNRNPC-205ENST00000553300 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 HSPA6P17066 643 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 FSTL1Q12841 308 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 SF3B3Q15393 1217 aaKnown RBP16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 MYD88Q99836 296 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
HNRNPC-205ENST00000553300 ABCC4O15439 1325 aa16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 GRAPQ13588 217 aa16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
HNRNPC-205ENST00000553300 LAMB2P55268 1798 aa16.86■□□□□ 0.29
HNRNPC-205ENST00000553300 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
HNRNPC-205ENST00000553300 VAMP4O75379 141 aa16.86■□□□□ 0.29
HNRNPC-205ENST00000553300 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
HNRNPC-205ENST00000553300 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
HNRNPC-205ENST00000553300 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
HNRNPC-205ENST00000553300 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms