RNA–Protein interactions for RNA: ENST00000553182.5

DDX23-218, Transcript of DEAD-box helicase 23, humanhuman

TSL 3

Gene DDX23, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-218ENST00000553182 UBN2Q6ZU65 1347 aa18.62■□□□□ 0.57
DDX23-218ENST00000553182 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
DDX23-218ENST00000553182 CHL1O00533 1208 aa18.61■□□□□ 0.57
DDX23-218ENST00000553182 SLC10A5Q5PT55 438 aa18.61■□□□□ 0.57
DDX23-218ENST00000553182 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
DDX23-218ENST00000553182 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
DDX23-218ENST00000553182 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
DDX23-218ENST00000553182 FZD9O00144 591 aa18.6■□□□□ 0.57
DDX23-218ENST00000553182 NTSR2O95665 410 aa18.6■□□□□ 0.57
DDX23-218ENST00000553182 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
DDX23-218ENST00000553182 NUP98P52948 1817 aa18.59■□□□□ 0.57
DDX23-218ENST00000553182 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
DDX23-218ENST00000553182 LDHDQ86WU2 507 aa18.59■□□□□ 0.57
DDX23-218ENST00000553182 TAF1DQ9H5J8 278 aaPredicted RBP18.59■□□□□ 0.57
DDX23-218ENST00000553182 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX23-218ENST00000553182 HOXB7P09629 217 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 OLFM4Q6UX06 510 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 PNMA8AQ86V59 439 aaPredicted RBP18.58■□□□□ 0.56
DDX23-218ENST00000553182 GPC2Q8N158 579 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 VPS33BQ9H267 617 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 CACNA1SQ13698 1873 aa18.58■□□□□ 0.56
DDX23-218ENST00000553182 CCDC146Q8IYE0 955 aa18.57■□□□□ 0.56
DDX23-218ENST00000553182 CREBZFQ9NS37 354 aa18.57■□□□□ 0.56
DDX23-218ENST00000553182 HACL1Q9UJ83 578 aa18.57■□□□□ 0.56
DDX23-218ENST00000553182 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
DDX23-218ENST00000553182 PPEF1O14829 653 aaPredicted RBP18.56■□□□□ 0.56
DDX23-218ENST00000553182 EIF6P56537 245 aaKnown RBP18.56■□□□□ 0.56
DDX23-218ENST00000553182 TCIRG1Q13488 830 aa18.56■□□□□ 0.56
DDX23-218ENST00000553182 TRIM35Q9UPQ4 493 aa18.56■□□□□ 0.56
DDX23-218ENST00000553182 BBOX1O75936 387 aa18.55■□□□□ 0.56
DDX23-218ENST00000553182 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
DDX23-218ENST00000553182 PROSER3Q2NL68 480 aa18.55■□□□□ 0.56
DDX23-218ENST00000553182 XAGE3Q8WTP9 111 aa18.55■□□□□ 0.56
DDX23-218ENST00000553182 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
DDX23-218ENST00000553182 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
DDX23-218ENST00000553182 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 SCN4AP35499 1836 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 ANXA1P04083 346 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 EPHX2P34913 555 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 NLRP10Q86W26 655 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
DDX23-218ENST00000553182 ATP6V0A2Q9Y487 856 aa18.54■□□□□ 0.56
DDX23-218ENST00000553182 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
DDX23-218ENST00000553182 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
DDX23-218ENST00000553182 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
DDX23-218ENST00000553182 LARGE2Q8N3Y3 721 aa18.53■□□□□ 0.56
DDX23-218ENST00000553182 SUPT20HQ8NEM7 779 aa18.53■□□□□ 0.56
DDX23-218ENST00000553182 NECTIN2Q92692 538 aa18.53■□□□□ 0.56
DDX23-218ENST00000553182 DBF4Q9UBU7 674 aaPredicted RBP18.53■□□□□ 0.56
DDX23-218ENST00000553182 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
DDX23-218ENST00000553182 EAPPQ56P03 285 aaPredicted RBP18.52■□□□□ 0.56
DDX23-218ENST00000553182 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
DDX23-218ENST00000553182 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.56
DDX23-218ENST00000553182 TRMT112Q9UI30 125 aaKnown RBP18.52■□□□□ 0.56
DDX23-218ENST00000553182 CLEC11AQ9Y240 323 aa18.52■□□□□ 0.56
DDX23-218ENST00000553182 PASKQ96RG2 1323 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 LMOD1P29536 600 aaPredicted RBP18.51■□□□□ 0.55
DDX23-218ENST00000553182 ANKRD13DQ6ZTN6 518 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 C3orf67Q6ZVT6 689 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 SP8Q8IXZ3 490 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
DDX23-218ENST00000553182 ITGBL1O95965 494 aaPredicted RBP18.5■□□□□ 0.55
DDX23-218ENST00000553182 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
DDX23-218ENST00000553182 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
DDX23-218ENST00000553182 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
DDX23-218ENST00000553182 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
DDX23-218ENST00000553182 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
DDX23-218ENST00000553182 KRT24Q2M2I5 525 aa18.49■□□□□ 0.55
DDX23-218ENST00000553182 RTFDC1Q9BY42 306 aaPredicted RBP18.49■□□□□ 0.55
DDX23-218ENST00000553182 GJA3Q9Y6H8 435 aa18.49■□□□□ 0.55
DDX23-218ENST00000553182 ABCC4O15439 1325 aa18.49■□□□□ 0.55
DDX23-218ENST00000553182 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
DDX23-218ENST00000553182 PPIP5K2O43314 1243 aa18.48■□□□□ 0.55
DDX23-218ENST00000553182 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
DDX23-218ENST00000553182 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
DDX23-218ENST00000553182 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
DDX23-218ENST00000553182 GNAI1P63096 354 aa18.47■□□□□ 0.55
DDX23-218ENST00000553182 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
DDX23-218ENST00000553182 GRAPQ13588 217 aa18.47■□□□□ 0.55
DDX23-218ENST00000553182 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
DDX23-218ENST00000553182 MPNDQ8N594 471 aa18.47■□□□□ 0.55
DDX23-218ENST00000553182 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
DDX23-218ENST00000553182 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
DDX23-218ENST00000553182 ZNRF3Q9ULT6 936 aa18.47■□□□□ 0.55
DDX23-218ENST00000553182 ZNF853P0CG23 659 aa18.46■□□□□ 0.55
DDX23-218ENST00000553182 HSPA1AP0DMV8 641 aaKnown RBP18.46■□□□□ 0.55
DDX23-218ENST00000553182 HSPA1BP0DMV9 641 aaKnown RBP18.46■□□□□ 0.55
DDX23-218ENST00000553182 HSP90B1P14625 803 aaKnown RBP18.46■□□□□ 0.55
DDX23-218ENST00000553182 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
DDX23-218ENST00000553182 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
DDX23-218ENST00000553182 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
DDX23-218ENST00000553182 MKRN1Q9UHC7 482 aaKnown RBP18.46■□□□□ 0.55
DDX23-218ENST00000553182 APAF1O14727 1248 aa18.45■□□□□ 0.54
DDX23-218ENST00000553182 PCNTO95613 3336 aa18.44■□□□□ 0.54
DDX23-218ENST00000553182 CNTNAP1P78357 1384 aa18.44■□□□□ 0.54
DDX23-218ENST00000553182 SCNN1DP51172 638 aa18.44■□□□□ 0.54
DDX23-218ENST00000553182 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms