RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
CDK4-214ENST00000552862 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
CDK4-214ENST00000552862 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
CDK4-214ENST00000552862 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
CDK4-214ENST00000552862 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
CDK4-214ENST00000552862 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
CDK4-214ENST00000552862 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
CDK4-214ENST00000552862 SCN4AP35499 1836 aa16.29■□□□□ 0.2
CDK4-214ENST00000552862 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
CDK4-214ENST00000552862 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
CDK4-214ENST00000552862 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
CDK4-214ENST00000552862 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
CDK4-214ENST00000552862 ECE1P42892 770 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 TNIP1Q15025 636 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
CDK4-214ENST00000552862 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
CDK4-214ENST00000552862 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
CDK4-214ENST00000552862 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
CDK4-214ENST00000552862 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
CDK4-214ENST00000552862 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
CDK4-214ENST00000552862 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
CDK4-214ENST00000552862 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.2
CDK4-214ENST00000552862 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDK4-214ENST00000552862 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
CDK4-214ENST00000552862 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
CDK4-214ENST00000552862 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
CDK4-214ENST00000552862 TIAM2Q8IVF5 1701 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 GPTP24298 496 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
CDK4-214ENST00000552862 HTRA3P83110 453 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 DEFB115Q30KQ5 88 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
CDK4-214ENST00000552862 SLX4Q8IY92 1834 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
CDK4-214ENST00000552862 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
CDK4-214ENST00000552862 TCIRG1Q13488 830 aa16.25■□□□□ 0.19
CDK4-214ENST00000552862 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
CDK4-214ENST00000552862 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
CDK4-214ENST00000552862 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
CDK4-214ENST00000552862 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
CDK4-214ENST00000552862 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
CDK4-214ENST00000552862 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
CDK4-214ENST00000552862 NTSR2O95665 410 aa16.24■□□□□ 0.19
CDK4-214ENST00000552862 ITGBL1O95965 494 aaPredicted RBP16.24■□□□□ 0.19
CDK4-214ENST00000552862 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
CDK4-214ENST00000552862 MPNDQ8N594 471 aa16.24■□□□□ 0.19
CDK4-214ENST00000552862 GJA3Q9Y6H8 435 aa16.24■□□□□ 0.19
CDK4-214ENST00000552862 CHL1O00533 1208 aa16.23■□□□□ 0.19
CDK4-214ENST00000552862 COL13A1Q5TAT6 717 aaPredicted RBP16.23■□□□□ 0.19
CDK4-214ENST00000552862 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
CDK4-214ENST00000552862 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
CDK4-214ENST00000552862 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
CDK4-214ENST00000552862 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
CDK4-214ENST00000552862 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
CDK4-214ENST00000552862 PLBD2Q8NHP8 589 aa16.22■□□□□ 0.19
CDK4-214ENST00000552862 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
CDK4-214ENST00000552862 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
CDK4-214ENST00000552862 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
CDK4-214ENST00000552862 H7C1D1 291 aa16.21■□□□□ 0.19
CDK4-214ENST00000552862 CA12O43570 354 aa16.21■□□□□ 0.19
CDK4-214ENST00000552862 EYA3Q99504 573 aa16.21■□□□□ 0.19
CDK4-214ENST00000552862 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
CDK4-214ENST00000552862 UBN2Q6ZU65 1347 aa16.2■□□□□ 0.18
CDK4-214ENST00000552862 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
CDK4-214ENST00000552862 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
CDK4-214ENST00000552862 GRAPQ13588 217 aa16.2■□□□□ 0.18
CDK4-214ENST00000552862 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
CDK4-214ENST00000552862 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
CDK4-214ENST00000552862 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
CDK4-214ENST00000552862 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
CDK4-214ENST00000552862 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
CDK4-214ENST00000552862 MAP2K2P36507 400 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 GNAI1P63096 354 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
CDK4-214ENST00000552862 PDIA6Q15084 440 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 XAGE3Q8WTP9 111 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 HHIPL1Q96JK4 782 aa16.19■□□□□ 0.18
CDK4-214ENST00000552862 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
CDK4-214ENST00000552862 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
CDK4-214ENST00000552862 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
CDK4-214ENST00000552862 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
CDK4-214ENST00000552862 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
CDK4-214ENST00000552862 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
CDK4-214ENST00000552862 G3V3G9 751 aa16.17■□□□□ 0.18
CDK4-214ENST00000552862 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
CDK4-214ENST00000552862 VEGFBP49765 207 aa16.17■□□□□ 0.18
CDK4-214ENST00000552862 SF3B3Q15393 1217 aaKnown RBP16.17■□□□□ 0.18
CDK4-214ENST00000552862 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
CDK4-214ENST00000552862 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
CDK4-214ENST00000552862 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms