RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RNF181Q9P0P0 153 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 ASAP1Q9ULH1 1129 aa7.57□□□□□ -1.2
HOXB3-213ENST00000552000 SMAPO00193 183 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 KCNA3P22001 575 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 TRAPPC3LQ5T215 181 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 NLGN1Q8N2Q7 840 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 GGNBP2Q9H3C7 697 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 TMOD3Q9NYL9 352 aa7.56□□□□□ -1.2
HOXB3-213ENST00000552000 TNRC6CQ9HCJ0 1690 aaKnown RBP7.56□□□□□ -1.2
HOXB3-213ENST00000552000 CCDC88AQ3V6T2 1871 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 NBPF26B4DH59 902 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 TSR1Q2NL82 804 aaKnown RBP7.55□□□□□ -1.2
HOXB3-213ENST00000552000 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
HOXB3-213ENST00000552000 ZNF516Q92618 1163 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 PIM2Q9P1W9 311 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
HOXB3-213ENST00000552000 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 INSRP06213 1382 aa7.55□□□□□ -1.2
HOXB3-213ENST00000552000 FYB1O15117 783 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 GYS1P13807 737 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 CAMK2BQ13554 666 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 ARHGEF1Q92888 912 aaKnown RBP7.54□□□□□ -1.2
HOXB3-213ENST00000552000 CDCA7LQ96GN5 454 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
HOXB3-213ENST00000552000 ATG3Q9NT62 314 aa7.54□□□□□ -1.2
HOXB3-213ENST00000552000 CHRNA5P30532 468 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 RFC4P35249 363 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 PRSS12P56730 875 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 RASSF7Q02833 373 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 PNMA3Q9UL41 463 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 SPG7Q9UQ90 795 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 FLT4P35916 1363 aa7.53□□□□□ -1.2
HOXB3-213ENST00000552000 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.21
HOXB3-213ENST00000552000 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
HOXB3-213ENST00000552000 KDRP35968 1356 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 VEGFAP15692 232 aaPredicted RBP7.51□□□□□ -1.21
HOXB3-213ENST00000552000 PHKG2P15735 406 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 DDR1Q08345 913 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 IFNL2Q8IZJ0 200 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 TATDN2Q93075 761 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 TESK2Q96S53 571 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
HOXB3-213ENST00000552000 CNTNAP4Q9C0A0 1308 aa7.51□□□□□ -1.21
HOXB3-213ENST00000552000 KIF20BQ96Q89 1820 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 COL5A3P25940 1745 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-213ENST00000552000 ST20-MTHFSA0A0A6YYL1 179 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 GLTPD2A6NH11 291 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 FOXN1O15353 648 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 PPM1GO15355 546 aaPredicted RBP7.5□□□□□ -1.21
HOXB3-213ENST00000552000 PKDCCQ504Y2 493 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 NKX2-3Q8TAU0 364 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 EYA1Q99502 592 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
HOXB3-213ENST00000552000 NCAPD2Q15021 1401 aa7.5□□□□□ -1.21
HOXB3-213ENST00000552000 ZC3H4Q9UPT8 1303 aaKnown RBP7.5□□□□□ -1.21
HOXB3-213ENST00000552000 KIF24Q5T7B8 1368 aa7.49□□□□□ -1.21
HOXB3-213ENST00000552000 LMNB1P20700 586 aa7.49□□□□□ -1.21
HOXB3-213ENST00000552000 COPS2P61201 443 aa7.49□□□□□ -1.21
HOXB3-213ENST00000552000 TMUB1Q9BVT8 246 aa7.49□□□□□ -1.21
HOXB3-213ENST00000552000 TONSLQ96HA7 1378 aa7.48□□□□□ -1.21
HOXB3-213ENST00000552000 AFDNP55196 1824 aaKnown RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 POTECB2RU33 542 aa7.48□□□□□ -1.21
HOXB3-213ENST00000552000 POLRMTO00411 1230 aaKnown RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 CRKLP46109 303 aaKnown RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
HOXB3-213ENST00000552000 TIAM2Q8IVF5 1701 aa7.48□□□□□ -1.21
HOXB3-213ENST00000552000 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
HOXB3-213ENST00000552000 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 USP42Q9H9J4 1324 aaKnown RBP7.48□□□□□ -1.21
HOXB3-213ENST00000552000 ZNF831Q5JPB2 1677 aa7.47□□□□□ -1.21
HOXB3-213ENST00000552000 ERVV-2B6SEH9 535 aa7.47□□□□□ -1.21
HOXB3-213ENST00000552000 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
HOXB3-213ENST00000552000 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
HOXB3-213ENST00000552000 PDIA6Q15084 440 aa7.47□□□□□ -1.21
HOXB3-213ENST00000552000 FAM161AQ3B820 660 aa7.47□□□□□ -1.21
HOXB3-213ENST00000552000 FAM198AQ9UFP1 575 aa7.47□□□□□ -1.21
HOXB3-213ENST00000552000 SPDYE16A6NNV3 312 aaPredicted RBP7.46□□□□□ -1.22
HOXB3-213ENST00000552000 NFKBIEO00221 500 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 TM4SF1P30408 202 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 CTCFP49711 727 aaPredicted RBP7.46□□□□□ -1.22
HOXB3-213ENST00000552000 CABP4P57796 275 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 PLCB2Q00722 1185 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 SLF2Q8IX21 1173 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 TTLL6Q8N841 843 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 WASHC2AQ641Q2 1341 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 CNTNAP1P78357 1384 aa7.46□□□□□ -1.22
HOXB3-213ENST00000552000 ZPR1O75312 459 aa7.45□□□□□ -1.22
HOXB3-213ENST00000552000 HSP90AB1P08238 724 aaKnown RBP7.45□□□□□ -1.22
HOXB3-213ENST00000552000 SLC19A1P41440 591 aa7.45□□□□□ -1.22
HOXB3-213ENST00000552000 LBX1P52954 281 aa7.45□□□□□ -1.22
HOXB3-213ENST00000552000 USPL1Q5W0Q7 1092 aa7.45□□□□□ -1.22
HOXB3-213ENST00000552000 ZNF530Q6P9A1 599 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms