RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 EFCAB6Q5THR3 1501 aa3.75□□□□□ -1.81
CPSF6-207ENST00000551516 TMEM229AB2RXF0 380 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 WASLO00401 505 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-207ENST00000551516 LGR5O75473 907 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 ABL1P00519 1130 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 INHAP05111 366 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 IGFBP4P22692 258 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 WEE1P30291 646 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 FOXC1Q12948 553 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 NNTQ13423 1086 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 OCLNQ16625 522 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 MYOM3Q5VTT5 1437 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 TAS1R3Q7RTX0 852 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 UBR1Q8IWV7 1749 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 SNIP1Q8TAD8 396 aaKnown RBP3.74□□□□□ -1.81
CPSF6-207ENST00000551516 EMID1Q96A84 441 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-207ENST00000551516 VTI1AQ96AJ9 217 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 BIN2Q9UBW5 565 aaPredicted RBP3.74□□□□□ -1.81
CPSF6-207ENST00000551516 SERTAD1Q9UHV2 236 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 CHMP3Q9Y3E7 222 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 TBX22Q9Y458 520 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 IQGAP1P46940 1657 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 ATAD2Q6PL18 1390 aa3.74□□□□□ -1.81
CPSF6-207ENST00000551516 ADGRL2O95490 1459 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 DIP2AQ14689 1571 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 VPS8Q8N3P4 1428 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 ERBINQ96RT1 1412 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 TTC24A2A3L6 582 aaPredicted RBP3.73□□□□□ -1.81
CPSF6-207ENST00000551516 SOWAHDA6NJG2 315 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 FOXO3O43524 673 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 LILRA1O75019 489 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 NR3C2P08235 984 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 ADD1P35611 737 aaKnown RBP3.73□□□□□ -1.81
CPSF6-207ENST00000551516 SERPINB4P48594 390 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 SCNN1DP51172 638 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 TNS4Q8IZW8 715 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 SCG3Q8WXD2 468 aaKnown RBP3.73□□□□□ -1.81
CPSF6-207ENST00000551516 SLC26A8Q96RN1 970 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 MKNK1Q9BUB5 465 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 ETNK1Q9HBU6 452 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 PLA2G2EQ9NZK7 142 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 EGFL7Q9UHF1 273 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 V9GY48 417 aaPredicted RBP3.73□□□□□ -1.81
CPSF6-207ENST00000551516 KIF15Q9NS87 1388 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 PLEKHG1Q9ULL1 1385 aa3.73□□□□□ -1.81
CPSF6-207ENST00000551516 FGD6Q6ZV73 1430 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 PRAG1Q86YV5 1406 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 DUOX2Q9NRD8 1548 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 A0A0G2JS52 829 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 LOC105371045A0A1W2PR82 267 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 A6NJY4 79 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 ADH1AP07327 375 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 ERCC3P19447 782 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 SCNN1AP37088 669 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 SMTNP53814 917 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 FKBP5Q13451 457 aaPredicted RBP3.72□□□□□ -1.81
CPSF6-207ENST00000551516 GLYCTKQ8IVS8 523 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 CYP4X1Q8N118 509 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 COL26A1Q96A83 441 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 XAGE2Q96GT9 111 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 SLC4A9Q96Q91 983 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 PRKD2Q9BZL6 878 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 ARHGEF10LQ9HCE6 1279 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 SLC52A1Q9NWF4 448 aa3.72□□□□□ -1.81
CPSF6-207ENST00000551516 COL16A1Q07092 1604 aaPredicted RBP3.72□□□□□ -1.81
CPSF6-207ENST00000551516 EIF2AK4Q9P2K8 1649 aaKnown RBP3.72□□□□□ -1.81
CPSF6-207ENST00000551516 NKTRP30414 1462 aaKnown RBP3.72□□□□□ -1.81
CPSF6-207ENST00000551516 KDM5AP29375 1690 aaKnown RBP3.71□□□□□ -1.81
CPSF6-207ENST00000551516 DAPK1P53355 1430 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 SETD5Q9C0A6 1442 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 POLR1AO95602 1720 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 H3BRB1 525 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 PPP1R12BO60237 982 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 ICMTO60725 284 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 ZIC2O95409 532 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 STAU1O95793 577 aaKnown RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 TSPY4P0CV99 314 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 TSPY10P0CW01 314 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 GTF2E1P29083 439 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 WDR4P57081 412 aaKnown RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 FKBP4Q02790 459 aaKnown RBP eCLIP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 SF3B2Q13435 895 aaKnown RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 NAA30Q147X3 362 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 FOXD4L5Q5VV16 416 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 BRINP3Q76B58 766 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 GTF3C2Q8WUA4 911 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 FOXD4L4Q8WXT5 416 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 CNKSR1Q969H4 720 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 NLRP3Q96P20 1036 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 ESYT1Q9BSJ8 1104 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 TSPAN10Q9H1Z9 355 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 TUT1Q9H6E5 874 aaKnown RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 ANO2Q9NQ90 1003 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 RAB6BQ9NRW1 208 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 RRP7BPQ9NSQ0 103 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 AMOTL2Q9Y2J4 779 aa3.71□□□□□ -1.82
CPSF6-207ENST00000551516 CDK12Q9NYV4 1490 aaPredicted RBP3.71□□□□□ -1.82
CPSF6-207ENST00000551516 AHDC1Q5TGY3 1603 aaPredicted RBP3.7□□□□□ -1.82
CPSF6-207ENST00000551516 A0A1W2PRU2 124 aa3.7□□□□□ -1.82
CPSF6-207ENST00000551516 MEN1O00255 615 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms