RNA–Protein interactions for RNA: ENST00000551506.1

SLC38A1-209, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 586 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-209ENST00000551506 NLRP10Q86W26 655 aa23.4■■□□□ 1.34
SLC38A1-209ENST00000551506 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
SLC38A1-209ENST00000551506 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
SLC38A1-209ENST00000551506 ELL2O00472 640 aaPredicted RBP23.39■■□□□ 1.33
SLC38A1-209ENST00000551506 SLC10A5Q5PT55 438 aa23.39■■□□□ 1.33
SLC38A1-209ENST00000551506 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
SLC38A1-209ENST00000551506 TAOK3Q9H2K8 898 aa23.39■■□□□ 1.33
SLC38A1-209ENST00000551506 HOXA10P31260 410 aaPredicted RBP23.38■■□□□ 1.33
SLC38A1-209ENST00000551506 SYNE4Q8N205 404 aa23.38■■□□□ 1.33
SLC38A1-209ENST00000551506 TSPYL6Q8N831 410 aa23.38■■□□□ 1.33
SLC38A1-209ENST00000551506 PLBD2Q8NHP8 589 aa23.38■■□□□ 1.33
SLC38A1-209ENST00000551506 UTP14AQ9BVJ6 771 aaKnown RBP23.38■■□□□ 1.33
SLC38A1-209ENST00000551506 CCDC93Q567U6 631 aa23.37■■□□□ 1.33
SLC38A1-209ENST00000551506 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
SLC38A1-209ENST00000551506 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
SLC38A1-209ENST00000551506 SLC51AQ86UW1 340 aa23.37■■□□□ 1.33
SLC38A1-209ENST00000551506 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
SLC38A1-209ENST00000551506 KDM2BQ8NHM5 1336 aa23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 ALDH1B1P30837 517 aa23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 ANKRD13DQ6ZTN6 518 aa23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 LAMB2P55268 1798 aa23.36■■□□□ 1.33
SLC38A1-209ENST00000551506 GLTPD2A6NH11 291 aa23.35■■□□□ 1.33
SLC38A1-209ENST00000551506 ISCA1Q9BUE6 129 aa23.35■■□□□ 1.33
SLC38A1-209ENST00000551506 PHAXQ9H814 394 aaKnown RBP23.35■■□□□ 1.33
SLC38A1-209ENST00000551506 RRAGCQ9HB90 399 aa23.35■■□□□ 1.33
SLC38A1-209ENST00000551506 TOMM70O94826 608 aa23.34■■□□□ 1.33
SLC38A1-209ENST00000551506 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
SLC38A1-209ENST00000551506 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.33
SLC38A1-209ENST00000551506 FKBP4Q02790 459 aaKnown RBP eCLIP23.33■■□□□ 1.33
SLC38A1-209ENST00000551506 RPGRQ92834 1020 aaKnown RBP23.33■■□□□ 1.33
SLC38A1-209ENST00000551506 CRAMP1Q96RY5 1269 aa23.33■■□□□ 1.33
SLC38A1-209ENST00000551506 HCLS1P14317 486 aaPredicted RBP23.32■■□□□ 1.32
SLC38A1-209ENST00000551506 IL16Q14005 1332 aa23.32■■□□□ 1.32
SLC38A1-209ENST00000551506 DDX60Q8IY21 1712 aaKnown RBP23.31■■□□□ 1.32
SLC38A1-209ENST00000551506 POTECB2RU33 542 aa23.31■■□□□ 1.32
SLC38A1-209ENST00000551506 ATP5J2-PTCD1G3V325 749 aa23.31■■□□□ 1.32
SLC38A1-209ENST00000551506 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
SLC38A1-209ENST00000551506 TRMT112Q9UI30 125 aaKnown RBP23.31■■□□□ 1.32
SLC38A1-209ENST00000551506 WDR90Q96KV7 1748 aa23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 CEP350Q5VT06 3117 aa23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 HSPA6P17066 643 aa23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 RTKN2Q8IZC4 609 aa23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 ZNF277Q9NRM2 450 aaPredicted RBP23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 SH3TC1Q8TE82 1336 aa23.3■■□□□ 1.32
SLC38A1-209ENST00000551506 TRIM28Q13263 835 aaKnown RBP23.29■■□□□ 1.32
SLC38A1-209ENST00000551506 RBM46Q8TBY0 533 aaKnown RBP23.29■■□□□ 1.32
SLC38A1-209ENST00000551506 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
SLC38A1-209ENST00000551506 COL4A5P29400 1685 aa23.28■■□□□ 1.32
SLC38A1-209ENST00000551506 ABCC4O15439 1325 aa23.28■■□□□ 1.32
SLC38A1-209ENST00000551506 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
SLC38A1-209ENST00000551506 PSMD1Q99460 953 aa23.27■■□□□ 1.32
SLC38A1-209ENST00000551506 TAF1P21675 1872 aa23.27■■□□□ 1.32
SLC38A1-209ENST00000551506 PPEF1O14829 653 aaPredicted RBP23.26■■□□□ 1.31
SLC38A1-209ENST00000551506 CC2D2BQ6DHV5 1058 aa23.26■■□□□ 1.31
SLC38A1-209ENST00000551506 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
SLC38A1-209ENST00000551506 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
SLC38A1-209ENST00000551506 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
SLC38A1-209ENST00000551506 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 DDNO94850 711 aaPredicted RBP23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 VEGFAP15692 232 aaPredicted RBP23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 DPY19L2Q6NUT2 758 aa23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 RIC3Q7Z5B4 369 aa23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 WDR63Q8IWG1 891 aa23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 SPINK5Q9NQ38 1064 aaPredicted RBP23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 COL4A1P02462 1669 aa23.25■■□□□ 1.31
SLC38A1-209ENST00000551506 IARSP41252 1262 aaKnown RBP23.24■■□□□ 1.31
SLC38A1-209ENST00000551506 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
SLC38A1-209ENST00000551506 C16orf71Q8IYS4 520 aaPredicted RBP23.23■■□□□ 1.31
SLC38A1-209ENST00000551506 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
SLC38A1-209ENST00000551506 ZNF541Q9H0D2 1346 aa23.23■■□□□ 1.31
SLC38A1-209ENST00000551506 G2E3Q7L622 706 aa23.22■■□□□ 1.31
SLC38A1-209ENST00000551506 MYD88Q99836 296 aa23.22■■□□□ 1.31
SLC38A1-209ENST00000551506 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
SLC38A1-209ENST00000551506 RTL5Q5HYW3 569 aaPredicted RBP23.21■■□□□ 1.31
SLC38A1-209ENST00000551506 METTL22Q9BUU2 404 aaPredicted RBP23.21■■□□□ 1.31
SLC38A1-209ENST00000551506 FZD9O00144 591 aa23.2■■□□□ 1.3
SLC38A1-209ENST00000551506 FSTL1Q12841 308 aa23.2■■□□□ 1.3
SLC38A1-209ENST00000551506 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
SLC38A1-209ENST00000551506 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 BBOX1O75936 387 aa23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 GRAPQ13588 217 aa23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 GRIPAP1Q4V328 841 aa23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 GRAPLQ8TC17 118 aaPredicted RBP23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 L3MBTL3Q96JM7 780 aaPredicted RBP23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 MAP3K2Q9Y2U5 619 aa23.19■■□□□ 1.3
SLC38A1-209ENST00000551506 PI4KAP2A4QPH2 592 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 VAMP4O75379 141 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 EXOSC9Q06265 439 aaKnown RBP23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 PI4KAP1Q8N8J0 262 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 CCDC191Q8NCU4 936 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 LRRC37AA6NMS7 1700 aa23.18■■□□□ 1.3
SLC38A1-209ENST00000551506 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms