RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
SCAF11-214ENST00000550893 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 ABCC2Q92887 1545 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 SAMD9Q5K651 1589 aa8.43□□□□□ -1.06
SCAF11-214ENST00000550893 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-214ENST00000550893 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
SCAF11-214ENST00000550893 BCRP11274 1271 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 BMP4P12644 408 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 SRPK2P78362 688 aaKnown RBP8.42□□□□□ -1.06
SCAF11-214ENST00000550893 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SCAF11-214ENST00000550893 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-214ENST00000550893 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
SCAF11-214ENST00000550893 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
SCAF11-214ENST00000550893 NOVA2Q9UNW9 492 aaKnown RBP8.41□□□□□ -1.06
SCAF11-214ENST00000550893 GPC6Q9Y625 555 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-214ENST00000550893 CD33P20138 364 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 IGFBP4P22692 258 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 KCNMA1Q12791 1236 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 C14orf37Q86TY3 774 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 CCDC97Q96F63 343 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-214ENST00000550893 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
SCAF11-214ENST00000550893 ZCCHC11Q5TAX3 1644 aaKnown RBP8.4□□□□□ -1.07
SCAF11-214ENST00000550893 ABCA8O94911 1581 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 EFSO43281 561 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 ENAMQ9NRM1 1142 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 KIF21BO75037 1637 aa8.39□□□□□ -1.07
SCAF11-214ENST00000550893 OIP5O43482 229 aa8.38□□□□□ -1.07
SCAF11-214ENST00000550893 WEE1P30291 646 aa8.38□□□□□ -1.07
SCAF11-214ENST00000550893 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
SCAF11-214ENST00000550893 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-214ENST00000550893 ZNF280CQ8ND82 737 aa8.38□□□□□ -1.07
SCAF11-214ENST00000550893 UHRF1BP1LA0JNW5 1464 aa8.38□□□□□ -1.07
SCAF11-214ENST00000550893 RNF225M0QZC1 329 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-214ENST00000550893 MARSP56192 900 aaKnown RBP8.37□□□□□ -1.07
SCAF11-214ENST00000550893 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
SCAF11-214ENST00000550893 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
SCAF11-214ENST00000550893 LRRC4BQ9NT99 713 aa8.37□□□□□ -1.07
SCAF11-214ENST00000550893 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
SCAF11-214ENST00000550893 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
SCAF11-214ENST00000550893 GDF2Q9UK05 429 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-214ENST00000550893 ATG7O95352 703 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 GOLGA6L1Q8N7Z2 621 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 GALNT6Q8NCL4 622 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 STK32AQ8WU08 396 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 ABCC10Q5T3U5 1492 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
SCAF11-214ENST00000550893 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
SCAF11-214ENST00000550893 KDM5BQ9UGL1 1544 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 LRRIQ1Q96JM4 1722 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 ARAFP10398 606 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
SCAF11-214ENST00000550893 EDARADDQ8WWZ3 215 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
SCAF11-214ENST00000550893 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-214ENST00000550893 NEURL1BA8MQ27 555 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 GSK3AP49840 483 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 FAM69CQ0P6D2 419 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 RTN1Q16799 776 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 KLF15Q9UIH9 416 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 TSPOAP1O95153 1857 aa8.34□□□□□ -1.07
SCAF11-214ENST00000550893 PLB1Q6P1J6 1458 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 FOXO3O43524 673 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 GLI2P10070 1586 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 TYRO3Q06418 890 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 PRR12Q9ULL5 1215 aa8.33□□□□□ -1.08
SCAF11-214ENST00000550893 PRMT3O60678 531 aa8.32□□□□□ -1.08
SCAF11-214ENST00000550893 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
SCAF11-214ENST00000550893 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
SCAF11-214ENST00000550893 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-214ENST00000550893 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-214ENST00000550893 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
SCAF11-214ENST00000550893 TNIKQ9UKE5 1360 aa8.32□□□□□ -1.08
SCAF11-214ENST00000550893 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
SCAF11-214ENST00000550893 GDF11O95390 407 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms