RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
PFDN5-212ENST00000550880 NEFMP07197 916 aa14.74□□□□□ -0.05
PFDN5-212ENST00000550880 GRM1Q13255 1194 aa14.74□□□□□ -0.05
PFDN5-212ENST00000550880 TAF7Q15545 349 aaPredicted RBP14.74□□□□□ -0.05
PFDN5-212ENST00000550880 HLFQ16534 295 aa14.74□□□□□ -0.05
PFDN5-212ENST00000550880 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
PFDN5-212ENST00000550880 KIF6Q6ZMV9 814 aa14.74□□□□□ -0.05
PFDN5-212ENST00000550880 USP50Q70EL3 339 aaPredicted RBP14.74□□□□□ -0.05
PFDN5-212ENST00000550880 GPR101Q96P66 508 aaPredicted RBP14.74□□□□□ -0.05
PFDN5-212ENST00000550880 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
PFDN5-212ENST00000550880 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
PFDN5-212ENST00000550880 RBM17Q96I25 401 aaKnown RBP14.73□□□□□ -0.05
PFDN5-212ENST00000550880 CAPNS2Q96L46 248 aa14.73□□□□□ -0.05
PFDN5-212ENST00000550880 CCDC85CA6NKD9 419 aa14.72□□□□□ -0.05
PFDN5-212ENST00000550880 FAM161AQ3B820 660 aa14.72□□□□□ -0.05
PFDN5-212ENST00000550880 NUTM1Q86Y26 1132 aa14.72□□□□□ -0.05
PFDN5-212ENST00000550880 NIM1KQ8IY84 436 aa14.72□□□□□ -0.05
PFDN5-212ENST00000550880 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
PFDN5-212ENST00000550880 ADAMTSL1Q8N6G6 1762 aa14.72□□□□□ -0.05
PFDN5-212ENST00000550880 HOXA10P31260 410 aaPredicted RBP14.71□□□□□ -0.05
PFDN5-212ENST00000550880 EPS15P42566 896 aa14.71□□□□□ -0.05
PFDN5-212ENST00000550880 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
PFDN5-212ENST00000550880 MAP3K15Q6ZN16 1313 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 PPEF1O14829 653 aaPredicted RBP14.7□□□□□ -0.06
PFDN5-212ENST00000550880 MAP2K2P36507 400 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 SCNN1DP51172 638 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 MLLT1Q03111 559 aaPredicted RBP14.7□□□□□ -0.06
PFDN5-212ENST00000550880 CYP4F22Q6NT55 531 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 VPS33BQ9H267 617 aa14.7□□□□□ -0.06
PFDN5-212ENST00000550880 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
PFDN5-212ENST00000550880 TCERG1O14776 1098 aaKnown RBP14.69□□□□□ -0.06
PFDN5-212ENST00000550880 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 CA12O43570 354 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 SLC34A2O95436 690 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 PPP1R42Q7Z4L9 355 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 ADARB2Q9NS39 739 aaKnown RBP14.69□□□□□ -0.06
PFDN5-212ENST00000550880 MIS18AQ9NYP9 233 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 TLL2Q9Y6L7 1015 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 ABCC12Q96J65 1359 aa14.69□□□□□ -0.06
PFDN5-212ENST00000550880 GPTP24298 496 aa14.68□□□□□ -0.06
PFDN5-212ENST00000550880 CST9Q5W186 159 aa14.68□□□□□ -0.06
PFDN5-212ENST00000550880 SUPT20HQ8NEM7 779 aa14.68□□□□□ -0.06
PFDN5-212ENST00000550880 NLRP3Q96P20 1036 aa14.68□□□□□ -0.06
PFDN5-212ENST00000550880 IBTKQ9P2D0 1353 aaPredicted RBP14.68□□□□□ -0.06
PFDN5-212ENST00000550880 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
PFDN5-212ENST00000550880 TRAF5O00463 557 aa14.67□□□□□ -0.06
PFDN5-212ENST00000550880 MYL6BP14649 208 aa14.67□□□□□ -0.06
PFDN5-212ENST00000550880 ZBTB3Q9H5J0 574 aa14.67□□□□□ -0.06
PFDN5-212ENST00000550880 GPRC5DQ9NZD1 345 aa14.67□□□□□ -0.06
PFDN5-212ENST00000550880 RIC1Q4ADV7 1423 aa14.66□□□□□ -0.06
PFDN5-212ENST00000550880 FMR1Q06787 632 aaKnown RBP eCLIP14.66□□□□□ -0.06
PFDN5-212ENST00000550880 SUSD4Q5VX71 490 aa14.66□□□□□ -0.06
PFDN5-212ENST00000550880 TTLL7Q6ZT98 887 aa14.66□□□□□ -0.06
PFDN5-212ENST00000550880 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
PFDN5-212ENST00000550880 ZNRF3Q9ULT6 936 aa14.66□□□□□ -0.06
PFDN5-212ENST00000550880 CELF2O95319 508 aaKnown RBP14.65□□□□□ -0.06
PFDN5-212ENST00000550880 PPP2R1AP30153 589 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 AOC3Q16853 763 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 ZNF34Q8IZ26 560 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 HHIPL1Q96JK4 782 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 ATP6V0A2Q9Y487 856 aa14.65□□□□□ -0.06
PFDN5-212ENST00000550880 AOC2O75106 756 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 RGS19P49795 217 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
PFDN5-212ENST00000550880 TNIP1Q15025 636 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
PFDN5-212ENST00000550880 SAPCD2Q86UD0 394 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 ZC3H15Q8WU90 426 aaKnown RBP14.64□□□□□ -0.07
PFDN5-212ENST00000550880 BCL2L13Q9BXK5 485 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 UBN2Q6ZU65 1347 aa14.64□□□□□ -0.07
PFDN5-212ENST00000550880 COL4A5P29400 1685 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 BBOX1O75936 387 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 NTSR2O95665 410 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 BRPF1P55201 1214 aaPredicted RBP14.63□□□□□ -0.07
PFDN5-212ENST00000550880 CXCL9Q07325 125 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 DPP8Q6V1X1 898 aaPredicted RBP14.63□□□□□ -0.07
PFDN5-212ENST00000550880 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
PFDN5-212ENST00000550880 ZNF408Q9H9D4 720 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 ERBB4Q15303 1308 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 CDHR2Q9BYE9 1310 aa14.63□□□□□ -0.07
PFDN5-212ENST00000550880 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
PFDN5-212ENST00000550880 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
PFDN5-212ENST00000550880 CDC37L1Q7L3B6 337 aa14.62□□□□□ -0.07
PFDN5-212ENST00000550880 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
PFDN5-212ENST00000550880 THSD7BQ9C0I4 1608 aa14.62□□□□□ -0.07
PFDN5-212ENST00000550880 LAMB4A4D0S4 1761 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 H7C1D1 291 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 SLC10A5Q5PT55 438 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 SP8Q8IXZ3 490 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 MPNDQ8N594 471 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
PFDN5-212ENST00000550880 GLIS2Q9BZE0 524 aaPredicted RBP14.61□□□□□ -0.07
PFDN5-212ENST00000550880 MCOLN1Q9GZU1 580 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 TRPM7Q96QT4 1865 aa14.61□□□□□ -0.07
PFDN5-212ENST00000550880 NUP98P52948 1817 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms