RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 DBF4Q9UBU7 674 aaPredicted RBP31.6■■■□□ 2.65
PXN-217ENST00000550795 GLTPD2A6NH11 291 aa31.59■■■□□ 2.65
PXN-217ENST00000550795 IBTKQ9P2D0 1353 aaPredicted RBP31.58■■■□□ 2.65
PXN-217ENST00000550795 C7orf43Q8WVR3 580 aa31.58■■■□□ 2.65
PXN-217ENST00000550795 APLP1P51693 650 aa31.57■■■□□ 2.64
PXN-217ENST00000550795 PARP10Q53GL7 1025 aa31.57■■■□□ 2.64
PXN-217ENST00000550795 PPP1R42Q7Z4L9 355 aa31.57■■■□□ 2.64
PXN-217ENST00000550795 TSR2Q969E8 191 aaKnown RBP31.57■■■□□ 2.64
PXN-217ENST00000550795 SNED1Q8TER0 1413 aa31.56■■■□□ 2.64
PXN-217ENST00000550795 TCIRG1Q13488 830 aa31.55■■■□□ 2.64
PXN-217ENST00000550795 CRY2Q49AN0 593 aa31.55■■■□□ 2.64
PXN-217ENST00000550795 C16orf71Q8IYS4 520 aaPredicted RBP31.55■■■□□ 2.64
PXN-217ENST00000550795 TAOK3Q9H2K8 898 aa31.55■■■□□ 2.64
PXN-217ENST00000550795 HYPKQ9NX55 129 aa31.55■■■□□ 2.64
PXN-217ENST00000550795 SALL2Q9Y467 1007 aaPredicted RBP31.55■■■□□ 2.64
PXN-217ENST00000550795 HSP90AB3PQ58FF7 597 aa31.54■■■□□ 2.64
PXN-217ENST00000550795 TSPYL6Q8N831 410 aa31.54■■■□□ 2.64
PXN-217ENST00000550795 UTP14AQ9BVJ6 771 aaKnown RBP31.54■■■□□ 2.64
PXN-217ENST00000550795 RIC1Q4ADV7 1423 aa31.54■■■□□ 2.64
PXN-217ENST00000550795 POTECB2RU33 542 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 OLFM4Q6UX06 510 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 ANKRD13DQ6ZTN6 518 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 C3orf67Q6ZVT6 689 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 NLRP10Q86W26 655 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 FAM9BQ8IZU0 186 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 PLBD2Q8NHP8 589 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 ZNF428Q96B54 188 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 LAMB2P55268 1798 aa31.53■■■□□ 2.64
PXN-217ENST00000550795 FSTL1Q12841 308 aa31.52■■■□□ 2.64
PXN-217ENST00000550795 SYNE4Q8N205 404 aa31.51■■■□□ 2.63
PXN-217ENST00000550795 DNAJC5GQ8N7S2 189 aa31.51■■■□□ 2.63
PXN-217ENST00000550795 ALDH1B1P30837 517 aa31.5■■■□□ 2.63
PXN-217ENST00000550795 HTRA3P83110 453 aa31.5■■■□□ 2.63
PXN-217ENST00000550795 NCBP3Q53F19 620 aaKnown RBP31.5■■■□□ 2.63
PXN-217ENST00000550795 PHAXQ9H814 394 aaKnown RBP31.5■■■□□ 2.63
PXN-217ENST00000550795 SLC10A5Q5PT55 438 aa31.49■■■□□ 2.63
PXN-217ENST00000550795 SOGA3Q5TF21 947 aa31.49■■■□□ 2.63
PXN-217ENST00000550795 RPGRQ92834 1020 aaKnown RBP31.48■■■□□ 2.63
PXN-217ENST00000550795 VEGFAP15692 232 aaPredicted RBP31.47■■■□□ 2.63
PXN-217ENST00000550795 HOXA10P31260 410 aaPredicted RBP31.47■■■□□ 2.63
PXN-217ENST00000550795 CCDC93Q567U6 631 aa31.47■■■□□ 2.63
PXN-217ENST00000550795 IL16Q14005 1332 aa31.47■■■□□ 2.63
PXN-217ENST00000550795 ATP5J2-PTCD1G3V325 749 aa31.46■■■□□ 2.63
PXN-217ENST00000550795 NLRP3Q96P20 1036 aa31.46■■■□□ 2.63
PXN-217ENST00000550795 TRMT112Q9UI30 125 aaKnown RBP31.46■■■□□ 2.63
PXN-217ENST00000550795 HCLS1P14317 486 aaPredicted RBP31.45■■■□□ 2.63
PXN-217ENST00000550795 SMC1BQ8NDV3 1235 aa31.45■■■□□ 2.63
PXN-217ENST00000550795 ISCA1Q9BUE6 129 aa31.45■■■□□ 2.63
PXN-217ENST00000550795 SCN4AP35499 1836 aa31.45■■■□□ 2.62
PXN-217ENST00000550795 COL4A5P29400 1685 aa31.44■■■□□ 2.62
PXN-217ENST00000550795 CCDC30Q5VVM6 783 aa31.44■■■□□ 2.62
PXN-217ENST00000550795 SLC51AQ86UW1 340 aa31.44■■■□□ 2.62
PXN-217ENST00000550795 TCERG1O14776 1098 aaKnown RBP31.43■■■□□ 2.62
PXN-217ENST00000550795 RBM17Q96I25 401 aaKnown RBP31.43■■■□□ 2.62
PXN-217ENST00000550795 RNF123Q5XPI4 1314 aa31.43■■■□□ 2.62
PXN-217ENST00000550795 FKBP4Q02790 459 aaKnown RBP eCLIP31.42■■■□□ 2.62
PXN-217ENST00000550795 RIC3Q7Z5B4 369 aa31.42■■■□□ 2.62
PXN-217ENST00000550795 WDR63Q8IWG1 891 aa31.42■■■□□ 2.62
PXN-217ENST00000550795 CRAMP1Q96RY5 1269 aa31.42■■■□□ 2.62
PXN-217ENST00000550795 SH3TC1Q8TE82 1336 aa31.42■■■□□ 2.62
PXN-217ENST00000550795 GOLGA2Q08379 1002 aa31.41■■■□□ 2.62
PXN-217ENST00000550795 DDNO94850 711 aaPredicted RBP31.4■■■□□ 2.62
PXN-217ENST00000550795 TWISTNBQ3B726 338 aaPredicted RBP31.4■■■□□ 2.62
PXN-217ENST00000550795 RTKN2Q8IZC4 609 aa31.4■■■□□ 2.62
PXN-217ENST00000550795 ZNF277Q9NRM2 450 aaPredicted RBP31.4■■■□□ 2.62
PXN-217ENST00000550795 ADAMTSL1Q8N6G6 1762 aa31.39■■■□□ 2.62
PXN-217ENST00000550795 DPY19L2Q6NUT2 758 aa31.39■■■□□ 2.62
PXN-217ENST00000550795 FANCIQ9NVI1 1328 aa31.39■■■□□ 2.62
PXN-217ENST00000550795 DDX60Q8IY21 1712 aaKnown RBP31.38■■■□□ 2.61
PXN-217ENST00000550795 FAM89AQ96GI7 184 aa31.38■■■□□ 2.61
PXN-217ENST00000550795 CHMP4AQ9BY43 222 aa31.38■■■□□ 2.61
PXN-217ENST00000550795 SPINK5Q9NQ38 1064 aaPredicted RBP31.38■■■□□ 2.61
PXN-217ENST00000550795 ZNF541Q9H0D2 1346 aa31.38■■■□□ 2.61
PXN-217ENST00000550795 TRIM28Q13263 835 aaKnown RBP31.37■■■□□ 2.61
PXN-217ENST00000550795 RTL5Q5HYW3 569 aaPredicted RBP31.36■■■□□ 2.61
PXN-217ENST00000550795 TAF1P21675 1872 aa31.35■■■□□ 2.61
PXN-217ENST00000550795 PPEF1O14829 653 aaPredicted RBP31.35■■■□□ 2.61
PXN-217ENST00000550795 POTEIP0CG38 1075 aa31.35■■■□□ 2.61
PXN-217ENST00000550795 POTEJP0CG39 1038 aa31.35■■■□□ 2.61
PXN-217ENST00000550795 MYD88Q99836 296 aa31.35■■■□□ 2.61
PXN-217ENST00000550795 ABCC4O15439 1325 aa31.34■■■□□ 2.61
PXN-217ENST00000550795 KLRG1Q96E93 195 aa31.34■■■□□ 2.61
PXN-217ENST00000550795 STK31Q9BXU1 1019 aa31.34■■■□□ 2.61
PXN-217ENST00000550795 CC2D2BQ6DHV5 1058 aa31.33■■■□□ 2.61
PXN-217ENST00000550795 G2E3Q7L622 706 aa31.33■■■□□ 2.61
PXN-217ENST00000550795 LTBP1Q14766 1721 aa31.32■■■□□ 2.61
PXN-217ENST00000550795 EXOSC9Q06265 439 aaKnown RBP31.32■■■□□ 2.6
PXN-217ENST00000550795 L3MBTL3Q96JM7 780 aaPredicted RBP31.32■■■□□ 2.6
PXN-217ENST00000550795 DDX58O95786 925 aaKnown RBP31.31■■■□□ 2.6
PXN-217ENST00000550795 SLC4A2P04920 1241 aa31.31■■■□□ 2.6
PXN-217ENST00000550795 IARSP41252 1262 aaKnown RBP31.31■■■□□ 2.6
PXN-217ENST00000550795 PSMD1Q99460 953 aa31.31■■■□□ 2.6
PXN-217ENST00000550795 METTL22Q9BUU2 404 aaPredicted RBP31.31■■■□□ 2.6
PXN-217ENST00000550795 MAP3K2Q9Y2U5 619 aa31.31■■■□□ 2.6
PXN-217ENST00000550795 PI4KAP2A4QPH2 592 aa31.29■■■□□ 2.6
PXN-217ENST00000550795 VAMP4O75379 141 aa31.29■■■□□ 2.6
PXN-217ENST00000550795 KSR2Q6VAB6 950 aa31.29■■■□□ 2.6
PXN-217ENST00000550795 DDX46Q7L014 1031 aaKnown RBP31.29■■■□□ 2.6
PXN-217ENST00000550795 PI4KAP1Q8N8J0 262 aa31.29■■■□□ 2.6
PXN-217ENST00000550795 ATP6V0A2Q9Y487 856 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms