RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PAPPAQ13219 1627 aa25.52■■□□□ 1.68
PRDM4-205ENST00000550376 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
PRDM4-205ENST00000550376 FAM89AQ96GI7 184 aa25.52■■□□□ 1.68
PRDM4-205ENST00000550376 COPRSQ9NQ92 184 aa25.52■■□□□ 1.68
PRDM4-205ENST00000550376 ZBTB1Q9Y2K1 713 aa25.52■■□□□ 1.68
PRDM4-205ENST00000550376 EDC3Q96F86 508 aaKnown RBP25.51■■□□□ 1.68
PRDM4-205ENST00000550376 USP42Q9H9J4 1324 aaKnown RBP25.51■■□□□ 1.67
PRDM4-205ENST00000550376 CYP19A1P11511 503 aaPredicted RBP25.51■■□□□ 1.67
PRDM4-205ENST00000550376 CCDC191Q8NCU4 936 aa25.5■■□□□ 1.67
PRDM4-205ENST00000550376 COL22A1Q8NFW1 1626 aaPredicted RBP25.5■■□□□ 1.67
PRDM4-205ENST00000550376 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
PRDM4-205ENST00000550376 C8orf37Q96NL8 207 aa25.5■■□□□ 1.67
PRDM4-205ENST00000550376 CHMP5Q9NZZ3 219 aa25.5■■□□□ 1.67
PRDM4-205ENST00000550376 TBC1D2BQ9UPU7 963 aa25.5■■□□□ 1.67
PRDM4-205ENST00000550376 ITGB4P16144 1822 aa25.49■■□□□ 1.67
PRDM4-205ENST00000550376 EIF5BO60841 1220 aaKnown RBP25.49■■□□□ 1.67
PRDM4-205ENST00000550376 VSIG10Q8N0Z9 540 aa25.49■■□□□ 1.67
PRDM4-205ENST00000550376 GPATCH3Q96I76 525 aa25.49■■□□□ 1.67
PRDM4-205ENST00000550376 NOL8Q76FK4 1167 aaKnown RBP25.49■■□□□ 1.67
PRDM4-205ENST00000550376 TEX13AQ9BXU3 409 aaPredicted RBP25.49■■□□□ 1.67
PRDM4-205ENST00000550376 NEK4P51957 841 aa25.48■■□□□ 1.67
PRDM4-205ENST00000550376 KIF6Q6ZMV9 814 aa25.48■■□□□ 1.67
PRDM4-205ENST00000550376 DBNLQ9UJU6 430 aaKnown RBP25.48■■□□□ 1.67
PRDM4-205ENST00000550376 SGSM2O43147 1006 aa25.48■■□□□ 1.67
PRDM4-205ENST00000550376 KCNQ2O43526 872 aa25.47■■□□□ 1.67
PRDM4-205ENST00000550376 FAM98CQ17RN3 349 aaKnown RBP25.47■■□□□ 1.67
PRDM4-205ENST00000550376 LRRC24Q50LG9 513 aa25.47■■□□□ 1.67
PRDM4-205ENST00000550376 ISCA1Q9BUE6 129 aa25.47■■□□□ 1.67
PRDM4-205ENST00000550376 UPF3BQ9BZI7 483 aaKnown RBP25.47■■□□□ 1.67
PRDM4-205ENST00000550376 SPATA31A5Q5VU36 1347 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 SPATA31A7Q8IWB4 1347 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 DDIT3P35638 169 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 TNNI3KQ59H18 835 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 PUS3Q9BZE2 481 aaKnown RBP25.46■■□□□ 1.67
PRDM4-205ENST00000550376 DIAPH3Q9NSV4 1193 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 FPGT-TNNI3KV9GXZ4 949 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 DBNDD2Q9BQY9 259 aa25.46■■□□□ 1.67
PRDM4-205ENST00000550376 CHGBP05060 677 aa25.45■■□□□ 1.66
PRDM4-205ENST00000550376 NGLY1Q96IV0 654 aa25.45■■□□□ 1.66
PRDM4-205ENST00000550376 FAM227BQ96M60 508 aa25.45■■□□□ 1.66
PRDM4-205ENST00000550376 PLCH1Q4KWH8 1693 aa25.44■■□□□ 1.66
PRDM4-205ENST00000550376 TIMM10P62072 90 aa25.44■■□□□ 1.66
PRDM4-205ENST00000550376 ATG9AQ7Z3C6 839 aa25.44■■□□□ 1.66
PRDM4-205ENST00000550376 NEUROD6Q96NK8 337 aa25.44■■□□□ 1.66
PRDM4-205ENST00000550376 KCNQ4P56696 695 aa25.43■■□□□ 1.66
PRDM4-205ENST00000550376 PTH1RQ03431 593 aa25.43■■□□□ 1.66
PRDM4-205ENST00000550376 MAP3K15Q6ZN16 1313 aa25.42■■□□□ 1.66
PRDM4-205ENST00000550376 ST18O60284 1047 aa25.42■■□□□ 1.66
PRDM4-205ENST00000550376 EVI5LQ96CN4 794 aa25.42■■□□□ 1.66
PRDM4-205ENST00000550376 LSG1Q9H089 658 aaKnown RBP25.42■■□□□ 1.66
PRDM4-205ENST00000550376 NUP188Q5SRE5 1749 aa25.42■■□□□ 1.66
PRDM4-205ENST00000550376 MCCP23508 829 aa25.41■■□□□ 1.66
PRDM4-205ENST00000550376 ATP6V1AP38606 617 aa25.41■■□□□ 1.66
PRDM4-205ENST00000550376 ZGPATQ8N5A5 531 aaKnown RBP25.41■■□□□ 1.66
PRDM4-205ENST00000550376 FAM177BA6PVY3 158 aa25.41■■□□□ 1.66
PRDM4-205ENST00000550376 GIGYF2Q6Y7W6 1299 aaKnown RBP25.41■■□□□ 1.66
PRDM4-205ENST00000550376 RASEFQ8IZ41 740 aa25.41■■□□□ 1.66
PRDM4-205ENST00000550376 THRAP3Q9Y2W1 955 aaKnown RBP25.41■■□□□ 1.66
PRDM4-205ENST00000550376 DNAJC2Q99543 621 aaKnown RBP25.4■■□□□ 1.66
PRDM4-205ENST00000550376 FSD1Q9BTV5 496 aa25.4■■□□□ 1.66
PRDM4-205ENST00000550376 AK9Q5TCS8 1911 aa25.4■■□□□ 1.66
PRDM4-205ENST00000550376 NMIQ13287 307 aaPredicted RBP25.39■■□□□ 1.66
PRDM4-205ENST00000550376 FAM182BQ5T319 152 aa25.39■■□□□ 1.66
PRDM4-205ENST00000550376 KIAA1211Q6ZU35 1233 aa25.39■■□□□ 1.66
PRDM4-205ENST00000550376 PTF1AQ7RTS3 328 aa25.39■■□□□ 1.66
PRDM4-205ENST00000550376 LARP6Q9BRS8 491 aaKnown RBP25.39■■□□□ 1.66
PRDM4-205ENST00000550376 CDCA7Q9BWT1 371 aaPredicted RBP25.39■■□□□ 1.66
PRDM4-205ENST00000550376 COL15A1P39059 1388 aa25.39■■□□□ 1.66
PRDM4-205ENST00000550376 HSPA4P34932 840 aa25.39■■□□□ 1.65
PRDM4-205ENST00000550376 DZIP3Q86Y13 1208 aaKnown RBP25.39■■□□□ 1.65
PRDM4-205ENST00000550376 TNPO1Q92973 898 aaKnown RBP25.38■■□□□ 1.65
PRDM4-205ENST00000550376 CPA1P15085 419 aa25.38■■□□□ 1.65
PRDM4-205ENST00000550376 ITPK1Q13572 414 aa25.38■■□□□ 1.65
PRDM4-205ENST00000550376 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
PRDM4-205ENST00000550376 A0A0D9SFI3 127 aa25.37■■□□□ 1.65
PRDM4-205ENST00000550376 RAD50Q92878 1312 aa25.37■■□□□ 1.65
PRDM4-205ENST00000550376 SMIM5Q71RC9 77 aa25.37■■□□□ 1.65
PRDM4-205ENST00000550376 TJP1Q07157 1748 aa25.37■■□□□ 1.65
PRDM4-205ENST00000550376 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 SIK1P57059 783 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 PKP1Q13835 747 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 CCDC57Q2TAC2 916 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 SLFNL1Q499Z3 407 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 ZBTB38Q8NAP3 1195 aaPredicted RBP25.36■■□□□ 1.65
PRDM4-205ENST00000550376 MCM4P33991 863 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 INTS5Q6P9B9 1019 aaKnown RBP25.36■■□□□ 1.65
PRDM4-205ENST00000550376 SNX14Q9Y5W7 946 aa25.36■■□□□ 1.65
PRDM4-205ENST00000550376 DOT1LQ8TEK3 1739 aa25.35■■□□□ 1.65
PRDM4-205ENST00000550376 EYA2O00167 538 aa25.35■■□□□ 1.65
PRDM4-205ENST00000550376 PCCAP05165 728 aaPredicted RBP25.35■■□□□ 1.65
PRDM4-205ENST00000550376 SSFA2P28290 1259 aa25.35■■□□□ 1.65
PRDM4-205ENST00000550376 CRKLP46109 303 aaKnown RBP25.35■■□□□ 1.65
PRDM4-205ENST00000550376 TRIM28Q13263 835 aaKnown RBP25.35■■□□□ 1.65
PRDM4-205ENST00000550376 DDX46Q7L014 1031 aaKnown RBP25.35■■□□□ 1.65
PRDM4-205ENST00000550376 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
PRDM4-205ENST00000550376 SLIT2O94813 1529 aa25.34■■□□□ 1.65
PRDM4-205ENST00000550376 PRPF40BQ6NWY9 871 aaKnown RBP25.34■■□□□ 1.65
PRDM4-205ENST00000550376 NRAPQ86VF7 1730 aa25.34■■□□□ 1.65
PRDM4-205ENST00000550376 ATP5JP18859 108 aa25.34■■□□□ 1.65
PRDM4-205ENST00000550376 TMX3Q96JJ7 454 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms