RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 RGL2O15211 777 aa12.06□□□□□ -0.48
UBE2N-203ENST00000549490 DIAPH1O60610 1272 aaKnown RBP12.06□□□□□ -0.48
UBE2N-203ENST00000549490 SOX10P56693 466 aa12.06□□□□□ -0.48
UBE2N-203ENST00000549490 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
UBE2N-203ENST00000549490 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
UBE2N-203ENST00000549490 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
UBE2N-203ENST00000549490 GPRC5DQ9NZD1 345 aa12.06□□□□□ -0.48
UBE2N-203ENST00000549490 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
UBE2N-203ENST00000549490 GTF2E1P29083 439 aaPredicted RBP12.05□□□□□ -0.48
UBE2N-203ENST00000549490 HLFQ16534 295 aa12.05□□□□□ -0.48
UBE2N-203ENST00000549490 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
UBE2N-203ENST00000549490 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
UBE2N-203ENST00000549490 NBPF15Q8N660 670 aa12.05□□□□□ -0.48
UBE2N-203ENST00000549490 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
UBE2N-203ENST00000549490 PGAP2Q9UHJ9 254 aa12.05□□□□□ -0.48
UBE2N-203ENST00000549490 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
UBE2N-203ENST00000549490 NOGQ13253 232 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 NIM1KQ8IY84 436 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 ABCC12Q96J65 1359 aa12.04□□□□□ -0.48
UBE2N-203ENST00000549490 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
UBE2N-203ENST00000549490 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
UBE2N-203ENST00000549490 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
UBE2N-203ENST00000549490 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
UBE2N-203ENST00000549490 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
UBE2N-203ENST00000549490 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
UBE2N-203ENST00000549490 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
UBE2N-203ENST00000549490 GMPSP49915 693 aaPredicted RBP12.02□□□□□ -0.49
UBE2N-203ENST00000549490 HIRAP54198 1017 aaPredicted RBP12.02□□□□□ -0.49
UBE2N-203ENST00000549490 CXCL9Q07325 125 aa12.02□□□□□ -0.49
UBE2N-203ENST00000549490 AOC3Q16853 763 aa12.02□□□□□ -0.49
UBE2N-203ENST00000549490 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.49
UBE2N-203ENST00000549490 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.49
UBE2N-203ENST00000549490 HUNKP57058 714 aa12.01□□□□□ -0.49
UBE2N-203ENST00000549490 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE2N-203ENST00000549490 CDC37L1Q7L3B6 337 aa12.01□□□□□ -0.49
UBE2N-203ENST00000549490 ZC3H15Q8WU90 426 aaKnown RBP12.01□□□□□ -0.49
UBE2N-203ENST00000549490 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
UBE2N-203ENST00000549490 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
UBE2N-203ENST00000549490 ZNRF3Q9ULT6 936 aa12.01□□□□□ -0.49
UBE2N-203ENST00000549490 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
UBE2N-203ENST00000549490 U2SURPO15042 1029 aaKnown RBP12□□□□□ -0.49
UBE2N-203ENST00000549490 DLK2Q6UY11 383 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
UBE2N-203ENST00000549490 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
UBE2N-203ENST00000549490 FAM155AB1AL88 458 aaPredicted RBP11.99□□□□□ -0.49
UBE2N-203ENST00000549490 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
UBE2N-203ENST00000549490 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
UBE2N-203ENST00000549490 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
UBE2N-203ENST00000549490 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
UBE2N-203ENST00000549490 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 TRPA1O75762 1119 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 KIF23Q02241 960 aaPredicted RBP11.98□□□□□ -0.49
UBE2N-203ENST00000549490 RGMBQ6NW40 437 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 RNF186Q9NXI6 227 aa11.98□□□□□ -0.49
UBE2N-203ENST00000549490 CDHR2Q9BYE9 1310 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 ERVV-1B6SEH8 477 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 RAD17O75943 681 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 GPTP24298 496 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 SUSD4Q5VX71 490 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 CTU1Q7Z7A3 348 aaKnown RBP11.97□□□□□ -0.49
UBE2N-203ENST00000549490 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
UBE2N-203ENST00000549490 CNOT7Q9UIV1 285 aaKnown RBP11.97□□□□□ -0.49
UBE2N-203ENST00000549490 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
UBE2N-203ENST00000549490 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
UBE2N-203ENST00000549490 TNIP1Q15025 636 aa11.96□□□□□ -0.49
UBE2N-203ENST00000549490 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
UBE2N-203ENST00000549490 MCM10Q7L590 875 aa11.96□□□□□ -0.49
UBE2N-203ENST00000549490 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
UBE2N-203ENST00000549490 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
UBE2N-203ENST00000549490 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
UBE2N-203ENST00000549490 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
UBE2N-203ENST00000549490 MAP3K15Q6ZN16 1313 aa11.95□□□□□ -0.5
UBE2N-203ENST00000549490 PRKAR2BP31323 418 aa11.95□□□□□ -0.5
UBE2N-203ENST00000549490 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
UBE2N-203ENST00000549490 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
UBE2N-203ENST00000549490 CSRNP1Q96S65 589 aa11.95□□□□□ -0.5
UBE2N-203ENST00000549490 GBA2Q9HCG7 927 aaPredicted RBP11.95□□□□□ -0.5
UBE2N-203ENST00000549490 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
UBE2N-203ENST00000549490 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
UBE2N-203ENST00000549490 H7C1D1 291 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
UBE2N-203ENST00000549490 NTSR2O95665 410 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 KIAA2012Q0VF49 1180 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 DPP8Q6V1X1 898 aaPredicted RBP11.94□□□□□ -0.5
UBE2N-203ENST00000549490 KRT26Q7Z3Y9 468 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
UBE2N-203ENST00000549490 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms