RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 TAF1DQ9H5J8 278 aaPredicted RBP26.74■■□□□ 1.87
SSH1-207ENST00000547862 SNED1Q8TER0 1413 aa26.73■■□□□ 1.87
SSH1-207ENST00000547862 RNF123Q5XPI4 1314 aa26.73■■□□□ 1.87
SSH1-207ENST00000547862 NTSR2O95665 410 aa26.73■■□□□ 1.87
SSH1-207ENST00000547862 LMOD3Q0VAK6 560 aa26.73■■□□□ 1.87
SSH1-207ENST00000547862 GIGYF2Q6Y7W6 1299 aaKnown RBP26.73■■□□□ 1.87
SSH1-207ENST00000547862 L3MBTL3Q96JM7 780 aaPredicted RBP26.73■■□□□ 1.87
SSH1-207ENST00000547862 PCNTO95613 3336 aa26.73■■□□□ 1.87
SSH1-207ENST00000547862 LDHDQ86WU2 507 aa26.72■■□□□ 1.87
SSH1-207ENST00000547862 ZNF34Q8IZ26 560 aa26.72■■□□□ 1.87
SSH1-207ENST00000547862 MKRN1Q9UHC7 482 aaKnown RBP26.72■■□□□ 1.87
SSH1-207ENST00000547862 ADAMTSL1Q8N6G6 1762 aa26.71■■□□□ 1.87
SSH1-207ENST00000547862 MYBBP1AQ9BQG0 1328 aaKnown RBP26.71■■□□□ 1.87
SSH1-207ENST00000547862 PPEF1O14829 653 aaPredicted RBP26.71■■□□□ 1.87
SSH1-207ENST00000547862 HSPA1AP0DMV8 641 aaKnown RBP26.71■■□□□ 1.87
SSH1-207ENST00000547862 HSPA1BP0DMV9 641 aaKnown RBP26.71■■□□□ 1.87
SSH1-207ENST00000547862 COL13A1Q5TAT6 717 aaPredicted RBP26.71■■□□□ 1.87
SSH1-207ENST00000547862 C3orf67Q6ZVT6 689 aa26.71■■□□□ 1.87
SSH1-207ENST00000547862 HACL1Q9UJ83 578 aa26.71■■□□□ 1.87
SSH1-207ENST00000547862 AIMP1Q12904 312 aaKnown RBP26.7■■□□□ 1.86
SSH1-207ENST00000547862 PPP1R42Q7Z4L9 355 aa26.7■■□□□ 1.86
SSH1-207ENST00000547862 CLEC11AQ9Y240 323 aa26.7■■□□□ 1.86
SSH1-207ENST00000547862 LAS1LQ9Y4W2 734 aaKnown RBP26.7■■□□□ 1.86
SSH1-207ENST00000547862 PDIA6Q15084 440 aa26.69■■□□□ 1.86
SSH1-207ENST00000547862 JDP2Q8WYK2 163 aa26.69■■□□□ 1.86
SSH1-207ENST00000547862 RBM17Q96I25 401 aaKnown RBP26.69■■□□□ 1.86
SSH1-207ENST00000547862 PSMD1Q99460 953 aa26.69■■□□□ 1.86
SSH1-207ENST00000547862 GJA3Q9Y6H8 435 aa26.69■■□□□ 1.86
SSH1-207ENST00000547862 EPHX2P34913 555 aa26.68■■□□□ 1.86
SSH1-207ENST00000547862 KRT24Q2M2I5 525 aa26.68■■□□□ 1.86
SSH1-207ENST00000547862 LRP10Q7Z4F1 713 aa26.68■■□□□ 1.86
SSH1-207ENST00000547862 CREBZFQ9NS37 354 aa26.68■■□□□ 1.86
SSH1-207ENST00000547862 LTBP1Q14766 1721 aa26.68■■□□□ 1.86
SSH1-207ENST00000547862 WDR43Q15061 677 aaKnown RBP eCLIP26.67■■□□□ 1.86
SSH1-207ENST00000547862 PARP10Q53GL7 1025 aa26.67■■□□□ 1.86
SSH1-207ENST00000547862 ZNF428Q96B54 188 aa26.67■■□□□ 1.86
SSH1-207ENST00000547862 TAF1P21675 1872 aa26.66■■□□□ 1.86
SSH1-207ENST00000547862 FZD9O00144 591 aa26.66■■□□□ 1.86
SSH1-207ENST00000547862 HOXA10P31260 410 aaPredicted RBP26.66■■□□□ 1.86
SSH1-207ENST00000547862 UTP14AQ9BVJ6 771 aaKnown RBP26.66■■□□□ 1.86
SSH1-207ENST00000547862 EIF6P56537 245 aaKnown RBP26.65■■□□□ 1.86
SSH1-207ENST00000547862 CC2D2BQ6DHV5 1058 aa26.65■■□□□ 1.86
SSH1-207ENST00000547862 LARGE2Q8N3Y3 721 aa26.65■■□□□ 1.86
SSH1-207ENST00000547862 XAGE3Q8WTP9 111 aa26.65■■□□□ 1.86
SSH1-207ENST00000547862 COPS6Q7L5N1 327 aa26.64■■□□□ 1.86
SSH1-207ENST00000547862 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
SSH1-207ENST00000547862 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.86
SSH1-207ENST00000547862 PASKQ96RG2 1323 aa26.64■■□□□ 1.85
SSH1-207ENST00000547862 CAPN15O75808 1086 aa26.63■■□□□ 1.85
SSH1-207ENST00000547862 GPC2Q8N158 579 aa26.63■■□□□ 1.85
SSH1-207ENST00000547862 BABAM1Q9NWV8 329 aa26.63■■□□□ 1.85
SSH1-207ENST00000547862 DDX60Q8IY21 1712 aaKnown RBP26.62■■□□□ 1.85
SSH1-207ENST00000547862 ABCC4O15439 1325 aa26.62■■□□□ 1.85
SSH1-207ENST00000547862 MAP1SQ66K74 1059 aaPredicted RBP26.61■■□□□ 1.85
SSH1-207ENST00000547862 TNS4Q8IZW8 715 aa26.61■■□□□ 1.85
SSH1-207ENST00000547862 RUNDC1Q96C34 613 aa26.61■■□□□ 1.85
SSH1-207ENST00000547862 TMX4Q9H1E5 349 aaPredicted RBP26.61■■□□□ 1.85
SSH1-207ENST00000547862 CNTNAP1P78357 1384 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 PPIP5K2O43314 1243 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 HCLS1P14317 486 aaPredicted RBP26.6■■□□□ 1.85
SSH1-207ENST00000547862 LMOD1P29536 600 aaPredicted RBP26.6■■□□□ 1.85
SSH1-207ENST00000547862 AOC3Q16853 763 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 HSP90AB3PQ58FF7 597 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 NIM1KQ8IY84 436 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 CHPF2Q9P2E5 772 aa26.6■■□□□ 1.85
SSH1-207ENST00000547862 NLRP10Q86W26 655 aa26.59■■□□□ 1.85
SSH1-207ENST00000547862 TRIM35Q9UPQ4 493 aa26.59■■□□□ 1.85
SSH1-207ENST00000547862 HDGFL1Q5TGJ6 251 aa26.58■■□□□ 1.85
SSH1-207ENST00000547862 PNMA8AQ86V59 439 aaPredicted RBP26.58■■□□□ 1.85
SSH1-207ENST00000547862 TRMT112Q9UI30 125 aaKnown RBP26.58■■□□□ 1.85
SSH1-207ENST00000547862 TMEM88BA6NKF7 163 aa26.57■■□□□ 1.84
SSH1-207ENST00000547862 ITGBL1O95965 494 aaPredicted RBP26.57■■□□□ 1.84
SSH1-207ENST00000547862 DDX21Q9NR30 783 aaKnown RBP eCLIP26.57■■□□□ 1.84
SSH1-207ENST00000547862 CHL1O00533 1208 aa26.56■■□□□ 1.84
SSH1-207ENST00000547862 GRIPAP1Q4V328 841 aa26.56■■□□□ 1.84
SSH1-207ENST00000547862 CNTROBQ8N137 903 aa26.56■■□□□ 1.84
SSH1-207ENST00000547862 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
SSH1-207ENST00000547862 ATP6V0A2Q9Y487 856 aa26.56■■□□□ 1.84
SSH1-207ENST00000547862 TRPM7Q96QT4 1865 aa26.55■■□□□ 1.84
SSH1-207ENST00000547862 LRRC37AA6NMS7 1700 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 EPS15P42566 896 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 SCNN1DP51172 638 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 TCIRG1Q13488 830 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 SLC10A5Q5PT55 438 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 SH3TC1Q8TE82 1336 aa26.54■■□□□ 1.84
SSH1-207ENST00000547862 DPP8Q6V1X1 898 aaPredicted RBP26.53■■□□□ 1.84
SSH1-207ENST00000547862 DDX46Q7L014 1031 aaKnown RBP26.53■■□□□ 1.84
SSH1-207ENST00000547862 VEGFBP49765 207 aa26.51■■□□□ 1.83
SSH1-207ENST00000547862 ABT1Q9ULW3 272 aaKnown RBP26.51■■□□□ 1.83
SSH1-207ENST00000547862 DUOX1Q9NRD9 1551 aa26.5■■□□□ 1.83
SSH1-207ENST00000547862 ATP5J2-PTCD1G3V325 749 aa26.5■■□□□ 1.83
SSH1-207ENST00000547862 MPNDQ8N594 471 aa26.5■■□□□ 1.83
SSH1-207ENST00000547862 SUPT20HQ8NEM7 779 aa26.5■■□□□ 1.83
SSH1-207ENST00000547862 FMR1Q06787 632 aaKnown RBP eCLIP26.49■■□□□ 1.83
SSH1-207ENST00000547862 GRAPQ13588 217 aa26.49■■□□□ 1.83
SSH1-207ENST00000547862 RTL5Q5HYW3 569 aaPredicted RBP26.49■■□□□ 1.83
SSH1-207ENST00000547862 PLBD2Q8NHP8 589 aa26.49■■□□□ 1.83
SSH1-207ENST00000547862 GRAPLQ8TC17 118 aaPredicted RBP26.49■■□□□ 1.83
SSH1-207ENST00000547862 COL4A1P02462 1669 aa26.49■■□□□ 1.83
SSH1-207ENST00000547862 FOXN1O15353 648 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms