RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 MAP3K15Q6ZN16 1313 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 FOXN1O15353 648 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 ECE1P42892 770 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 HLFQ16534 295 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 PAXIP1Q6ZW49 1069 aaPredicted RBP12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 NIM1KQ8IY84 436 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 SUPT20HQ8NEM7 779 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
AC055716.3-201ENST00000547533 RASSF10A6NK89 507 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 MYL6BP14649 208 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 MAP1SQ66K74 1059 aaPredicted RBP12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 VPS33BQ9H267 617 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 ERBB4Q15303 1308 aa12.02□□□□□ -0.49
AC055716.3-201ENST00000547533 GPTP24298 496 aa12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 WDR33Q9C0J8 1336 aaKnown RBP12.01□□□□□ -0.49
AC055716.3-201ENST00000547533 LBX1P52954 281 aa12□□□□□ -0.49
AC055716.3-201ENST00000547533 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
AC055716.3-201ENST00000547533 DDX21Q9NR30 783 aaKnown RBP eCLIP12□□□□□ -0.49
AC055716.3-201ENST00000547533 WBP1LQ9NX94 342 aa12□□□□□ -0.49
AC055716.3-201ENST00000547533 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 EIF4A1P60842 406 aaKnown RBP11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
AC055716.3-201ENST00000547533 ANKRD36CQ5JPF3 1778 aa11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 LMOD3Q0VAK6 560 aa11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 ADARB2Q9NS39 739 aaKnown RBP11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 TSPYL4Q9UJ04 414 aa11.98□□□□□ -0.49
AC055716.3-201ENST00000547533 GRM1Q13255 1194 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 SUSD4Q5VX71 490 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 ZNF34Q8IZ26 560 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
AC055716.3-201ENST00000547533 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 CA12O43570 354 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 BBOX1O75936 387 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 EIF2S2P20042 333 aaKnown RBP11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 TNIP1Q15025 636 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 DPP8Q6V1X1 898 aaPredicted RBP11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 CAPNS2Q96L46 248 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 ZNRF3Q9ULT6 936 aa11.96□□□□□ -0.49
AC055716.3-201ENST00000547533 NTSR2O95665 410 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 MAP2K2P36507 400 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 EPS15P42566 896 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 SCNN1DP51172 638 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 AOC3Q16853 763 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 TMC4Q7Z404 712 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 LAMB2P55268 1798 aa11.95□□□□□ -0.5
AC055716.3-201ENST00000547533 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 SLC10A5Q5PT55 438 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 CIAPIN1Q6FI81 312 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 MPNDQ8N594 471 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 GPRC5DQ9NZD1 345 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 LTBP1Q14766 1721 aa11.94□□□□□ -0.5
AC055716.3-201ENST00000547533 ABCC4O15439 1325 aa11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 H7C1D1 291 aa11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 RIPK4P57078 832 aa11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
AC055716.3-201ENST00000547533 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
AC055716.3-201ENST00000547533 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
AC055716.3-201ENST00000547533 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
AC055716.3-201ENST00000547533 HHIPL1Q96JK4 782 aa11.92□□□□□ -0.5
AC055716.3-201ENST00000547533 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
AC055716.3-201ENST00000547533 COL4A5P29400 1685 aa11.91□□□□□ -0.5
AC055716.3-201ENST00000547533 CCDC85CA6NKD9 419 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms