RNA–Protein interactions for RNA: ENST00000547206.5

NR4A1-208, Transcript of nuclear receptor subfamily 4 group A member 1, human

TSL 4

Gene NR4A1, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR4A1-208	ENST00000547206	UTP14A	Q9BVJ6	771 aa	Known RBP	11.69	□□□□□ -0.54
NR4A1-208	ENST00000547206	MRS2	Q9HD23	443 aa		11.69	□□□□□ -0.54
NR4A1-208	ENST00000547206	DBF4	Q9UBU7	674 aa	Predicted RBP	11.69	□□□□□ -0.54
NR4A1-208	ENST00000547206	GLTPD2	A6NH11	291 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	TOMM70	O94826	608 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	TCIRG1	Q13488	830 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	CCDC27	Q2M243	656 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	NCBP3	Q53F19	620 aa	Known RBP	11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	RPGR	Q92834	1020 aa	Known RBP	11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	RRAGC	Q9HB90	399 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	HYPK	Q9NX55	129 aa		11.68	□□□□□ -0.54
NR4A1-208	ENST00000547206	RNF123	Q5XPI4	1314 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	HSPA6	P17066	643 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	HOXA10	P31260	410 aa	Predicted RBP	11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	SLC10A5	Q5PT55	438 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	NLRP10	Q86W26	655 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	RTKN2	Q8IZC4	609 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	PLBD2	Q8NHP8	589 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	RBM17	Q96I25	401 aa	Known RBP	11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	NLRP3	Q96P20	1036 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	LAMB2	P55268	1798 aa		11.67	□□□□□ -0.54
NR4A1-208	ENST00000547206	ELL2	O00472	640 aa	Predicted RBP	11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	DPY19L2	Q6NUT2	758 aa		11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	ANKRD13D	Q6ZTN6	518 aa		11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	RBM46	Q8TBY0	533 aa	Known RBP	11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	CRAMP1	Q96RY5	1269 aa		11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	CHMP4A	Q9BY43	222 aa		11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	WDR90	Q96KV7	1748 aa		11.66	□□□□□ -0.54
NR4A1-208	ENST00000547206	CC2D2B	Q6DHV5	1058 aa		11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	OLFM4	Q6UX06	510 aa		11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	C3orf67	Q6ZVT6	689 aa		11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	WWC1	Q8IX03	1113 aa		11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	C8orf58	Q8NAV2	365 aa		11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	TRMT112	Q9UI30	125 aa	Known RBP	11.65	□□□□□ -0.54
NR4A1-208	ENST00000547206	IL16	Q14005	1332 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	SH3TC1	Q8TE82	1336 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	SNED1	Q8TER0	1413 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	VEGFA	P15692	232 aa	Predicted RBP	11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	CCDC30	Q5VVM6	783 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	SYNE4	Q8N205	404 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	ISCA1	Q9BUE6	129 aa		11.64	□□□□□ -0.55
NR4A1-208	ENST00000547206	HCLS1	P14317	486 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	GOLGA2	Q08379	1002 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	FSTL1	Q12841	308 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	GRIPAP1	Q4V328	841 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	RIC3	Q7Z5B4	369 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	TSPYL6	Q8N831	410 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	TSR2	Q969E8	191 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	PSMD1	Q99460	953 aa		11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	PHAX	Q9H814	394 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	DDX60	Q8IY21	1712 aa	Known RBP	11.63	□□□□□ -0.55
NR4A1-208	ENST00000547206	CACNA1F	O60840	1977 aa		11.62	□□□□□ -0.55
NR4A1-208	ENST00000547206	POTEC	B2RU33	542 aa		11.62	□□□□□ -0.55
NR4A1-208	ENST00000547206	PPEF1	O14829	653 aa	Predicted RBP	11.62	□□□□□ -0.55
NR4A1-208	ENST00000547206	IARS	P41252	1262 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-208	ENST00000547206	TRIM28	Q13263	835 aa	Known RBP	11.62	□□□□□ -0.55
NR4A1-208	ENST00000547206	ABCC4	O15439	1325 aa		11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	TAF1	P21675	1872 aa		11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	ATP5J2-PTCD1	G3V325	749 aa		11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	TCERG1	O14776	1098 aa	Known RBP	11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	DDN	O94850	711 aa	Predicted RBP	11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	APLP1	P51693	650 aa		11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	WDR63	Q8IWG1	891 aa		11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	TMX4	Q9H1E5	349 aa	Predicted RBP	11.61	□□□□□ -0.55
NR4A1-208	ENST00000547206	SCN4A	P35499	1836 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	BBOX1	O75936	387 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	DDX58	O95786	925 aa	Known RBP	11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	TWISTNB	Q3B726	338 aa	Predicted RBP	11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	DDX46	Q7L014	1031 aa	Known RBP	11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	FAM9B	Q8IZU0	186 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	SMC1B	Q8NDV3	1235 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	FAM89A	Q96GI7	184 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	STK31	Q9BXU1	1019 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	SALL2	Q9Y467	1007 aa	Predicted RBP	11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	ATP6V0A2	Q9Y487	856 aa		11.6	□□□□□ -0.55
NR4A1-208	ENST00000547206	FZD9	O00144	591 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	GRAP	Q13588	217 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	SP8	Q8IXZ3	490 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	CCDC191	Q8NCU4	936 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	GRAPL	Q8TC17	118 aa	Predicted RBP	11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	ZNF428	Q96B54	188 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	MYD88	Q99836	296 aa		11.59	□□□□□ -0.55
NR4A1-208	ENST00000547206	IQCA1L	A6NCM1	817 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	IRS4	O14654	1257 aa	Predicted RBP	11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	SF3B3	Q15393	1217 aa	Known RBP	11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	RTL5	Q5HYW3	569 aa	Predicted RBP	11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	TMC4	Q7Z404	712 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	SLC51A	Q86UW1	340 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	LARGE2	Q8N3Y3	721 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	JDP2	Q8WYK2	163 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	METTL22	Q9BUU2	404 aa	Predicted RBP	11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	VPS33B	Q9H267	617 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	ZNF541	Q9H0D2	1346 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	FANCI	Q9NVI1	1328 aa		11.58	□□□□□ -0.56
NR4A1-208	ENST00000547206	HSP90B1	P14625	803 aa	Known RBP	11.57	□□□□□ -0.56

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