RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 EVI5LQ96CN4 794 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 LIMCH1Q9UPQ0 1083 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 SNX14Q9Y5W7 946 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 KCNQ3O43525 872 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 TOM1L2Q6ZVM7 507 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 ZSCAN31Q96LW9 406 aaPredicted RBP27.99■■■□□ 2.07
FOXA1-202ENST00000545425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.99■■■□□ 2.07
FOXA1-202ENST00000545425 WDR17Q8IZU2 1322 aa27.99■■■□□ 2.07
FOXA1-202ENST00000545425 ZSCAN30Q86W11 494 aa27.98■■■□□ 2.07
FOXA1-202ENST00000545425 ATP6V1DQ9Y5K8 247 aa27.98■■■□□ 2.07
FOXA1-202ENST00000545425 IFIT2P09913 472 aaKnown RBP27.97■■■□□ 2.07
FOXA1-202ENST00000545425 PDLIM2Q96JY6 352 aa27.97■■■□□ 2.07
FOXA1-202ENST00000545425 BRWD3Q6RI45 1802 aa27.97■■■□□ 2.07
FOXA1-202ENST00000545425 THSD7AQ9UPZ6 1657 aa27.97■■■□□ 2.07
FOXA1-202ENST00000545425 SH2B1Q9NRF2 756 aaPredicted RBP27.97■■■□□ 2.07
FOXA1-202ENST00000545425 GRM8O00222 908 aa27.96■■■□□ 2.07
FOXA1-202ENST00000545425 SNRKQ9NRH2 765 aa27.96■■■□□ 2.07
FOXA1-202ENST00000545425 COL18A1P39060 1754 aa27.96■■■□□ 2.07
FOXA1-202ENST00000545425 CSB-PGBD3P0DP91 1061 aa27.95■■■□□ 2.07
FOXA1-202ENST00000545425 CSPP1Q1MSJ5 1256 aa27.95■■■□□ 2.06
FOXA1-202ENST00000545425 UPF3BQ9BZI7 483 aaKnown RBP27.95■■■□□ 2.06
FOXA1-202ENST00000545425 EP400Q96L91 3159 aa27.94■■■□□ 2.06
FOXA1-202ENST00000545425 SF3B2Q13435 895 aaKnown RBP27.94■■■□□ 2.06
FOXA1-202ENST00000545425 VPS53Q5VIR6 699 aa27.94■■■□□ 2.06
FOXA1-202ENST00000545425 SCN11AQ9UI33 1791 aa27.94■■■□□ 2.06
FOXA1-202ENST00000545425 MRC1P22897 1456 aa27.94■■■□□ 2.06
FOXA1-202ENST00000545425 LETM1O95202 739 aaPredicted RBP27.93■■■□□ 2.06
FOXA1-202ENST00000545425 COL15A1P39059 1388 aa27.93■■■□□ 2.06
FOXA1-202ENST00000545425 MCM5P33992 734 aa27.92■■■□□ 2.06
FOXA1-202ENST00000545425 TMEM63CQ9P1W3 806 aa27.92■■■□□ 2.06
FOXA1-202ENST00000545425 PRIM1P49642 420 aaKnown RBP27.92■■■□□ 2.06
FOXA1-202ENST00000545425 G3BP1Q13283 466 aaKnown RBP eCLIP27.92■■■□□ 2.06
FOXA1-202ENST00000545425 RBSNQ9H1K0 784 aa27.92■■■□□ 2.06
FOXA1-202ENST00000545425 IL25Q9H293 177 aa27.92■■■□□ 2.06
FOXA1-202ENST00000545425 ERBB3P21860 1342 aa27.91■■■□□ 2.06
FOXA1-202ENST00000545425 FAM184AQ8NB25 1140 aa27.91■■■□□ 2.06
FOXA1-202ENST00000545425 CARD10Q9BWT7 1032 aa27.91■■■□□ 2.06
FOXA1-202ENST00000545425 NEXNQ0ZGT2 675 aa27.9■■■□□ 2.06
FOXA1-202ENST00000545425 CDCA7Q9BWT1 371 aaPredicted RBP27.9■■■□□ 2.06
FOXA1-202ENST00000545425 ZKSCAN1P17029 563 aaPredicted RBP27.9■■■□□ 2.06
FOXA1-202ENST00000545425 CWC27Q6UX04 472 aaKnown RBP27.9■■■□□ 2.06
FOXA1-202ENST00000545425 SPG7Q9UQ90 795 aa27.9■■■□□ 2.06
FOXA1-202ENST00000545425 RAPGEF4Q8WZA2 1011 aa27.89■■■□□ 2.06
FOXA1-202ENST00000545425 ZSWIM6Q9HCJ5 1215 aa27.89■■■□□ 2.06
FOXA1-202ENST00000545425 ERBB4Q15303 1308 aa27.89■■■□□ 2.05
FOXA1-202ENST00000545425 ZSCAN22P10073 491 aaPredicted RBP27.88■■■□□ 2.05
FOXA1-202ENST00000545425 AK2P54819 239 aa27.88■■■□□ 2.05
FOXA1-202ENST00000545425 FAM196AQ6ZSG2 479 aa27.88■■■□□ 2.05
FOXA1-202ENST00000545425 RFX7Q2KHR2 1363 aa27.88■■■□□ 2.05
FOXA1-202ENST00000545425 RPAP1Q9BWH6 1393 aaPredicted RBP27.88■■■□□ 2.05
FOXA1-202ENST00000545425 MSNP26038 577 aaKnown RBP27.88■■■□□ 2.05
FOXA1-202ENST00000545425 SMC3Q9UQE7 1217 aa27.88■■■□□ 2.05
FOXA1-202ENST00000545425 CYP46A1Q9Y6A2 500 aa27.88■■■□□ 2.05
FOXA1-202ENST00000545425 PSMA5P28066 241 aa27.87■■■□□ 2.05
FOXA1-202ENST00000545425 FAM182BQ5T319 152 aa27.87■■■□□ 2.05
FOXA1-202ENST00000545425 TICAM2Q86XR7 235 aa27.87■■■□□ 2.05
FOXA1-202ENST00000545425 ALDH8A1Q9H2A2 487 aaPredicted RBP27.87■■■□□ 2.05
FOXA1-202ENST00000545425 SLC52A2Q9HAB3 445 aa27.87■■■□□ 2.05
FOXA1-202ENST00000545425 MAP4K4O95819 1239 aaPredicted RBP27.86■■■□□ 2.05
FOXA1-202ENST00000545425 ANXA1P04083 346 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 UVSSAQ2YD98 709 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 ZNF790Q6PG37 636 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 AACSQ86V21 672 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 TSPY26PQ9H489 355 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 CCDC171Q6TFL3 1326 aa27.86■■■□□ 2.05
FOXA1-202ENST00000545425 TATP17735 454 aaPredicted RBP27.85■■■□□ 2.05
FOXA1-202ENST00000545425 PROSER3Q2NL68 480 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.85■■■□□ 2.05
FOXA1-202ENST00000545425 STX6O43752 255 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 PDIA6Q15084 440 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 RNF20Q5VTR2 975 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 RUFY3Q7L099 469 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 RASEFQ8IZ41 740 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 SUCLG2Q96I99 432 aa27.85■■■□□ 2.05
FOXA1-202ENST00000545425 RBM27Q9P2N5 1060 aaKnown RBP27.85■■■□□ 2.05
FOXA1-202ENST00000545425 SYCE3A1L190 88 aa27.84■■■□□ 2.05
FOXA1-202ENST00000545425 TERF1P54274 439 aa27.84■■■□□ 2.05
FOXA1-202ENST00000545425 NECTIN1Q15223 517 aa27.84■■■□□ 2.05
FOXA1-202ENST00000545425 ANKRD1Q15327 319 aa27.84■■■□□ 2.05
FOXA1-202ENST00000545425 PDRG1Q9NUG6 133 aa27.84■■■□□ 2.05
FOXA1-202ENST00000545425 NOL7Q9UMY1 257 aaKnown RBP27.84■■■□□ 2.05
FOXA1-202ENST00000545425 DDB1Q16531 1140 aa27.83■■■□□ 2.05
FOXA1-202ENST00000545425 RIC3Q7Z5B4 369 aa27.83■■■□□ 2.05
FOXA1-202ENST00000545425 NAP1L5Q96NT1 182 aaPredicted RBP27.83■■■□□ 2.05
FOXA1-202ENST00000545425 NLRP2Q9NX02 1062 aa27.83■■■□□ 2.05
FOXA1-202ENST00000545425 CASTP20810 708 aaKnown RBP27.83■■■□□ 2.05
FOXA1-202ENST00000545425 NOL8Q76FK4 1167 aaKnown RBP27.83■■■□□ 2.05
FOXA1-202ENST00000545425 METTL22Q9BUU2 404 aaPredicted RBP27.83■■■□□ 2.05
FOXA1-202ENST00000545425 HMG20BQ9P0W2 317 aa27.83■■■□□ 2.05
FOXA1-202ENST00000545425 CCDC39Q9UFE4 941 aa27.83■■■□□ 2.05
FOXA1-202ENST00000545425 UBE2HP62256 183 aa27.82■■■□□ 2.04
FOXA1-202ENST00000545425 CWF19L2Q2TBE0 894 aaKnown RBP27.82■■■□□ 2.04
FOXA1-202ENST00000545425 MAP4K1Q92918 833 aa27.82■■■□□ 2.04
FOXA1-202ENST00000545425 BICC1Q9H694 974 aaKnown RBP27.82■■■□□ 2.04
FOXA1-202ENST00000545425 CCDC183Q5T5S1 534 aa27.81■■■□□ 2.04
FOXA1-202ENST00000545425 USP48Q86UV5 1035 aa27.81■■■□□ 2.04
FOXA1-202ENST00000545425 IFNL2Q8IZJ0 200 aa27.81■■■□□ 2.04
FOXA1-202ENST00000545425 C5P01031 1676 aa27.81■■■□□ 2.04
FOXA1-202ENST00000545425 RGPD5Q99666 1765 aa27.81■■■□□ 2.04
FOXA1-202ENST00000545425 SASH1O94885 1247 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms