RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CCDC87Q9NVE4 849 aa10.02□□□□□ -0.81
COPA-206ENST00000545266 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
COPA-206ENST00000545266 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
COPA-206ENST00000545266 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
COPA-206ENST00000545266 IGHA2P01877 340 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 PDGFAP04085 211 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 GJD3Q8N144 294 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 PIK3R5Q8WYR1 880 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 PHF24Q9UPV7 400 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 KCNMB2Q9Y691 235 aa10.01□□□□□ -0.81
COPA-206ENST00000545266 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
COPA-206ENST00000545266 EPB42P16452 691 aa10□□□□□ -0.81
COPA-206ENST00000545266 USP5P45974 858 aa10□□□□□ -0.81
COPA-206ENST00000545266 SFSWAPQ12872 951 aaKnown RBP10□□□□□ -0.81
COPA-206ENST00000545266 CCDC27Q2M243 656 aa10□□□□□ -0.81
COPA-206ENST00000545266 ABHD17AQ96GS6 310 aa10□□□□□ -0.81
COPA-206ENST00000545266 STRN4Q9NRL3 753 aa10□□□□□ -0.81
COPA-206ENST00000545266 KCNH4Q9UQ05 1017 aa10□□□□□ -0.81
COPA-206ENST00000545266 MARSP56192 900 aaKnown RBP9.99□□□□□ -0.81
COPA-206ENST00000545266 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
COPA-206ENST00000545266 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 DNAJC14Q6Y2X3 702 aaPredicted RBP9.99□□□□□ -0.81
COPA-206ENST00000545266 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
COPA-206ENST00000545266 GPR152Q8TDT2 470 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 EDEM1Q92611 657 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 EFCC1Q9HA90 598 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 BRPF3Q9ULD4 1205 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 POLIQ9UNA4 740 aa9.99□□□□□ -0.81
COPA-206ENST00000545266 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
COPA-206ENST00000545266 CDC14CA4D256 554 aa9.98□□□□□ -0.81
COPA-206ENST00000545266 KHNYNO15037 678 aaKnown RBP9.98□□□□□ -0.81
COPA-206ENST00000545266 NDUFB5O43674 189 aa9.98□□□□□ -0.81
COPA-206ENST00000545266 VEGFBP49765 207 aa9.98□□□□□ -0.81
COPA-206ENST00000545266 GAS6Q14393 721 aa9.98□□□□□ -0.81
COPA-206ENST00000545266 FGFR3P22607 806 aa9.97□□□□□ -0.81
COPA-206ENST00000545266 TRIP4Q15650 581 aaPredicted RBP9.97□□□□□ -0.81
COPA-206ENST00000545266 RGL4Q8IZJ4 473 aa9.97□□□□□ -0.81
COPA-206ENST00000545266 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
COPA-206ENST00000545266 ASB16Q96NS5 453 aa9.97□□□□□ -0.81
COPA-206ENST00000545266 GSX2Q9BZM3 304 aa9.97□□□□□ -0.81
COPA-206ENST00000545266 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
COPA-206ENST00000545266 DNM1Q05193 864 aaKnown RBP9.96□□□□□ -0.82
COPA-206ENST00000545266 GGNBP2Q9H3C7 697 aa9.96□□□□□ -0.82
COPA-206ENST00000545266 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
COPA-206ENST00000545266 GPR25O00155 361 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 PCSK2P16519 638 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
COPA-206ENST00000545266 EHHADHQ08426 723 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 AAMPQ13685 434 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 SLC16A10Q8TF71 515 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 FNDC3AQ9Y2H6 1198 aaKnown RBP9.95□□□□□ -0.82
COPA-206ENST00000545266 USP20Q9Y2K6 914 aa9.95□□□□□ -0.82
COPA-206ENST00000545266 ERCC3P19447 782 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 MAPK1P28482 360 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 CTBSQ01459 385 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 PDE3BQ13370 1112 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 PDE12Q6L8Q7 609 aaKnown RBP9.94□□□□□ -0.82
COPA-206ENST00000545266 TMC7Q7Z402 723 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 CMTR1Q8N1G2 835 aaKnown RBP9.94□□□□□ -0.82
COPA-206ENST00000545266 IRF7Q92985 503 aa9.94□□□□□ -0.82
COPA-206ENST00000545266 ALKBH8Q96BT7 664 aaKnown RBP9.94□□□□□ -0.82
COPA-206ENST00000545266 C2CD2LO14523 706 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 XYLBO75191 536 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 CD33P20138 364 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 CCINQ13939 588 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 LCE2CQ5TA81 110 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 DMRTB1Q96MA1 342 aa9.93□□□□□ -0.82
COPA-206ENST00000545266 MAP3K6O95382 1288 aa9.92□□□□□ -0.82
COPA-206ENST00000545266 SPEM2Q0P670 501 aa9.92□□□□□ -0.82
COPA-206ENST00000545266 DSC3Q14574 896 aa9.92□□□□□ -0.82
COPA-206ENST00000545266 COL19A1Q14993 1142 aa9.92□□□□□ -0.82
COPA-206ENST00000545266 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
COPA-206ENST00000545266 ZSCAN29Q8IWY8 852 aaPredicted RBP9.92□□□□□ -0.82
COPA-206ENST00000545266 SLC30A3Q99726 388 aa9.92□□□□□ -0.82
COPA-206ENST00000545266 AVENQ9NQS1 362 aaPredicted RBP9.92□□□□□ -0.82
COPA-206ENST00000545266 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
COPA-206ENST00000545266 TREHO43280 583 aa9.91□□□□□ -0.82
COPA-206ENST00000545266 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
COPA-206ENST00000545266 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
COPA-206ENST00000545266 MBIPQ9NS73 344 aa9.91□□□□□ -0.82
COPA-206ENST00000545266 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
COPA-206ENST00000545266 GPR182O15218 404 aa9.9□□□□□ -0.82
COPA-206ENST00000545266 KRT76Q01546 638 aa9.9□□□□□ -0.82
COPA-206ENST00000545266 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
COPA-206ENST00000545266 HOXD8P13378 290 aaPredicted RBP9.89□□□□□ -0.83
COPA-206ENST00000545266 MX2P20592 715 aa9.89□□□□□ -0.83
COPA-206ENST00000545266 ZNF468Q5VIY5 522 aaPredicted RBP9.89□□□□□ -0.83
COPA-206ENST00000545266 ZNF775Q96BV0 537 aaPredicted RBP9.89□□□□□ -0.83
COPA-206ENST00000545266 ELP3Q9H9T3 547 aa9.89□□□□□ -0.83
COPA-206ENST00000545266 ZFATQ9P243 1243 aa9.89□□□□□ -0.83
COPA-206ENST00000545266 ANKRD33BA6NCL7 494 aa9.88□□□□□ -0.83
COPA-206ENST00000545266 MAP2K3P46734 347 aa9.88□□□□□ -0.83
COPA-206ENST00000545266 NPAS4Q8IUM7 802 aa9.88□□□□□ -0.83
COPA-206ENST00000545266 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
COPA-206ENST00000545266 MDFIQ99750 246 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms