RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
TNFRSF1A-214ENST00000543048 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 GPTP24298 496 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
TNFRSF1A-214ENST00000543048 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 NPR1P16066 1061 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ADCY9O60503 1353 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 C21orf2O43822 256 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 MIER1Q8N108 512 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 IL16Q14005 1332 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 PLBD2Q8NHP8 589 aa12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 UTP14AQ9BVJ6 771 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-214ENST00000543048 HAX1O00165 279 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 NTSR2O95665 410 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 LMNB1P20700 586 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 CCDC30Q5VVM6 783 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
TNFRSF1A-214ENST00000543048 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RASSF7Q02833 373 aa12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
TNFRSF1A-214ENST00000543048 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-214ENST00000543048 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
TNFRSF1A-214ENST00000543048 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-214ENST00000543048 NFKBIEO00221 500 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 PRELPP51888 382 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
TNFRSF1A-214ENST00000543048 LAMB2P55268 1798 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 ZC3H4Q9UPT8 1303 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-214ENST00000543048 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 CCDC93Q567U6 631 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 TAF1P21675 1872 aa12.52□□□□□ -0.41
TNFRSF1A-214ENST00000543048 KIF3CO14782 793 aa12.51□□□□□ -0.41
TNFRSF1A-214ENST00000543048 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-214ENST00000543048 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
TNFRSF1A-214ENST00000543048 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 VAMP4O75379 141 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 GRIPAP1Q4V328 841 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms