RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 IGKV5-2P06315 115 aa21.77■■□□□ 1.07
RABGGTA-203ENST00000543002 NUTM1Q86Y26 1132 aa21.77■■□□□ 1.07
RABGGTA-203ENST00000543002 NOB1Q9ULX3 412 aaKnown RBP21.77■■□□□ 1.07
RABGGTA-203ENST00000543002 BCAR3O75815 825 aa21.76■■□□□ 1.07
RABGGTA-203ENST00000543002 ERFEQ4G0M1 354 aa21.76■■□□□ 1.07
RABGGTA-203ENST00000543002 LINS1Q8NG48 757 aa21.76■■□□□ 1.07
RABGGTA-203ENST00000543002 CWC25Q9NXE8 425 aaPredicted RBP21.76■■□□□ 1.07
RABGGTA-203ENST00000543002 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
RABGGTA-203ENST00000543002 NEURL1BA8MQ27 555 aa21.75■■□□□ 1.07
RABGGTA-203ENST00000543002 PXDNLA1KZ92 1463 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 PDE6BP35913 854 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 BEND3Q5T5X7 828 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 ARHGAP45Q92619 1136 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 PDZRN3Q9UPQ7 1066 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 ABCC12Q96J65 1359 aa21.74■■□□□ 1.07
RABGGTA-203ENST00000543002 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 ANKRD31Q8N7Z5 1873 aa21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 DPEP1P16444 411 aa21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 SLC10A5Q5PT55 438 aa21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 SLC4A10Q6U841 1118 aa21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
RABGGTA-203ENST00000543002 KIAA1551Q9HCM1 1747 aa21.72■■□□□ 1.07
RABGGTA-203ENST00000543002 A0A0G2JLW4 131 aa21.72■■□□□ 1.07
RABGGTA-203ENST00000543002 IPO8O15397 1037 aaKnown RBP21.72■■□□□ 1.07
RABGGTA-203ENST00000543002 ZBTB38Q8NAP3 1195 aaPredicted RBP21.72■■□□□ 1.07
RABGGTA-203ENST00000543002 KLRG2A4D1S0 409 aaPredicted RBP21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 PCCAP05165 728 aaPredicted RBP21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 CHRNA5P30532 468 aa21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 GCKRQ14397 625 aa21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 C2CD5Q86YS7 1000 aa21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 SYNE4Q8N205 404 aa21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 FAM89AQ96GI7 184 aa21.71■■□□□ 1.07
RABGGTA-203ENST00000543002 H0YIN7 160 aa21.7■■□□□ 1.06
RABGGTA-203ENST00000543002 ALDH1L1O75891 902 aa21.7■■□□□ 1.06
RABGGTA-203ENST00000543002 KCNA3P22001 575 aa21.7■■□□□ 1.06
RABGGTA-203ENST00000543002 SRCIN1Q9C0H9 1055 aa21.7■■□□□ 1.06
RABGGTA-203ENST00000543002 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
RABGGTA-203ENST00000543002 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
RABGGTA-203ENST00000543002 FRAT1Q92837 279 aaPredicted RBP21.69■■□□□ 1.06
RABGGTA-203ENST00000543002 HCLS1P14317 486 aaPredicted RBP21.68■■□□□ 1.06
RABGGTA-203ENST00000543002 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
RABGGTA-203ENST00000543002 NLRP3Q96P20 1036 aa21.68■■□□□ 1.06
RABGGTA-203ENST00000543002 H7C1W4 665 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 IRS4O14654 1257 aaPredicted RBP21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 SRGNP10124 158 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 CRY2Q49AN0 593 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 ATF7IPQ6VMQ6 1270 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 CDHR2Q9BYE9 1310 aa21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 TNRC6CQ9HCJ0 1690 aaKnown RBP21.67■■□□□ 1.06
RABGGTA-203ENST00000543002 TRIM27P14373 513 aa21.66■■□□□ 1.06
RABGGTA-203ENST00000543002 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
RABGGTA-203ENST00000543002 JARID2Q92833 1246 aaPredicted RBP21.66■■□□□ 1.06
RABGGTA-203ENST00000543002 PIM2Q9P1W9 311 aa21.66■■□□□ 1.06
RABGGTA-203ENST00000543002 NPR1P16066 1061 aa21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 CCT4P50991 539 aaKnown RBP21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 STYK1Q6J9G0 422 aa21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 C3orf67Q6ZVT6 689 aa21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 MASTLQ96GX5 879 aa21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 ABCC4O15439 1325 aa21.65■■□□□ 1.06
RABGGTA-203ENST00000543002 COL11A2P13942 1736 aaPredicted RBP21.64■■□□□ 1.06
RABGGTA-203ENST00000543002 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.06
RABGGTA-203ENST00000543002 CASP7P55210 303 aa21.64■■□□□ 1.05
RABGGTA-203ENST00000543002 UBE3BQ7Z3V4 1068 aa21.64■■□□□ 1.05
RABGGTA-203ENST00000543002 DDX60Q8IY21 1712 aaKnown RBP21.64■■□□□ 1.05
RABGGTA-203ENST00000543002 GRM8O00222 908 aa21.63■■□□□ 1.05
RABGGTA-203ENST00000543002 ZNF622Q969S3 477 aaKnown RBP eCLIP21.63■■□□□ 1.05
RABGGTA-203ENST00000543002 TNNQ9UQP3 1299 aa21.63■■□□□ 1.05
RABGGTA-203ENST00000543002 BRCA1P38398 1863 aaKnown RBP21.63■■□□□ 1.05
RABGGTA-203ENST00000543002 PDE8AO60658 829 aa21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 HOXA10P31260 410 aaPredicted RBP21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 SF3B3Q15393 1217 aaKnown RBP21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 INTS3Q68E01 1043 aaKnown RBP21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 TTLL6Q8N841 843 aa21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 RPGRQ92834 1020 aaKnown RBP21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 CNKSR1Q969H4 720 aa21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 C9orf78Q9NZ63 289 aaPredicted RBP21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 WWC3Q9ULE0 1092 aa21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 LAMB2P55268 1798 aa21.62■■□□□ 1.05
RABGGTA-203ENST00000543002 DALRD3Q5D0E6 543 aaKnown RBP21.61■■□□□ 1.05
RABGGTA-203ENST00000543002 CLUAP1Q96AJ1 413 aa21.61■■□□□ 1.05
RABGGTA-203ENST00000543002 GPR162Q16538 588 aa21.6■■□□□ 1.05
RABGGTA-203ENST00000543002 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
RABGGTA-203ENST00000543002 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
RABGGTA-203ENST00000543002 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
RABGGTA-203ENST00000543002 UTYO14607 1347 aa21.6■■□□□ 1.05
RABGGTA-203ENST00000543002 YBX3P16989 372 aaKnown RBP eCLIP21.59■■□□□ 1.05
RABGGTA-203ENST00000543002 ALDH1B1P30837 517 aa21.59■■□□□ 1.05
RABGGTA-203ENST00000543002 RBM17Q96I25 401 aaKnown RBP21.59■■□□□ 1.05
RABGGTA-203ENST00000543002 CRAMP1Q96RY5 1269 aa21.59■■□□□ 1.05
RABGGTA-203ENST00000543002 USP44Q9H0E7 712 aa21.59■■□□□ 1.05
RABGGTA-203ENST00000543002 DCAF8L1A6NGE4 600 aa21.58■■□□□ 1.05
RABGGTA-203ENST00000543002 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.05
RABGGTA-203ENST00000543002 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
RABGGTA-203ENST00000543002 CTSWP56202 376 aa21.57■■□□□ 1.04
RABGGTA-203ENST00000543002 PRPF40BQ6NWY9 871 aaKnown RBP21.57■■□□□ 1.04
RABGGTA-203ENST00000543002 MS4A1P11836 297 aa21.56■■□□□ 1.04
RABGGTA-203ENST00000543002 CCDC152Q4G0S7 254 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms