RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 NEUROD4Q9HD90 331 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 BRD7Q9NPI1 651 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 ELOA3CA0A087WX78 387 aaPredicted RBP6.76□□□□□ -1.33
LDHB-209ENST00000542765 ELOA3DA6NLF2 546 aaPredicted RBP6.76□□□□□ -1.33
LDHB-209ENST00000542765 IGHA1P01876 353 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 ELOA3BQ3SY89 546 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 TMEM164Q5U3C3 297 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 BTLAQ7Z6A9 289 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 ELOA3Q8NG57 546 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 CEP63Q96MT8 703 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 SUV39H2Q9H5I1 410 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 PRR12Q9ULL5 1215 aa6.76□□□□□ -1.33
LDHB-209ENST00000542765 KRBA1A5PL33 1030 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 FOXO3O43524 673 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 GRNP28799 593 aaKnown RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 SPEM2Q0P670 501 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 HIF1AQ16665 826 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 ALYREFQ86V81 257 aaKnown RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 CHMP7Q8WUX9 453 aaPredicted RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 MYO19Q96H55 970 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
LDHB-209ENST00000542765 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
LDHB-209ENST00000542765 TGFBR3LH3BV60 316 aa6.74□□□□□ -1.33
LDHB-209ENST00000542765 GNB5O14775 395 aa6.74□□□□□ -1.33
LDHB-209ENST00000542765 OCLNQ16625 522 aa6.74□□□□□ -1.33
LDHB-209ENST00000542765 STARD13Q9Y3M8 1113 aa6.74□□□□□ -1.33
LDHB-209ENST00000542765 PROCP04070 461 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 AMPD1P23109 780 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 INPP5BP32019 993 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 RRAGCQ9HB90 399 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 PRDM6Q9NQX0 595 aa6.73□□□□□ -1.33
LDHB-209ENST00000542765 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 EFCC1Q9HA90 598 aa6.72□□□□□ -1.33
LDHB-209ENST00000542765 FKBP5Q13451 457 aaPredicted RBP6.71□□□□□ -1.34
LDHB-209ENST00000542765 C20orf204Q6ZNR8 217 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 SPOCK3Q9BQ16 436 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 KLK14Q9P0G3 267 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 SLAIN2Q9P270 581 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 LRFN2Q9ULH4 789 aa6.71□□□□□ -1.34
LDHB-209ENST00000542765 TMEM88BA6NKF7 163 aa6.7□□□□□ -1.34
LDHB-209ENST00000542765 PIK3R2O00459 728 aa6.7□□□□□ -1.34
LDHB-209ENST00000542765 PRMT3O60678 531 aa6.7□□□□□ -1.34
LDHB-209ENST00000542765 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
LDHB-209ENST00000542765 RAB44Q7Z6P3 723 aaPredicted RBP6.7□□□□□ -1.34
LDHB-209ENST00000542765 CLP1Q92989 425 aaKnown RBP6.7□□□□□ -1.34
LDHB-209ENST00000542765 CARNS1A5YM72 827 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 OPLAHO14841 1288 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 ALAS2P22557 587 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 DGKZQ13574 1117 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 C11orf91Q3C1V1 193 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 MICALL1Q8N3F8 863 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 RETREG2Q8NC44 543 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 PRIMPOLQ96LW4 560 aa6.69□□□□□ -1.34
LDHB-209ENST00000542765 MSTNO14793 375 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 ALBP02768 609 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 ADH7P40394 386 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 IDH3AP50213 366 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 NEUROD1Q13562 356 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 SUZ12Q15022 739 aaKnown RBP6.68□□□□□ -1.34
LDHB-209ENST00000542765 COX20Q5RI15 118 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 COL26A1Q96A83 441 aa6.68□□□□□ -1.34
LDHB-209ENST00000542765 NOP53Q9NZM5 478 aaKnown RBP6.68□□□□□ -1.34
LDHB-209ENST00000542765 MICAL2O94851 1124 aa6.67□□□□□ -1.34
LDHB-209ENST00000542765 NID1P14543 1247 aa6.67□□□□□ -1.34
LDHB-209ENST00000542765 BHMTQ93088 406 aa6.67□□□□□ -1.34
LDHB-209ENST00000542765 PLVAPQ9BX97 442 aa6.67□□□□□ -1.34
LDHB-209ENST00000542765 CXXC1Q9P0U4 656 aaPredicted RBP6.67□□□□□ -1.34
LDHB-209ENST00000542765 USTQ9Y2C2 406 aa6.67□□□□□ -1.34
LDHB-209ENST00000542765 M0R082 166 aa6.66□□□□□ -1.34
LDHB-209ENST00000542765 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
LDHB-209ENST00000542765 CCINQ13939 588 aa6.66□□□□□ -1.34
LDHB-209ENST00000542765 ZNF417Q8TAU3 575 aa6.66□□□□□ -1.34
LDHB-209ENST00000542765 ZNF587Q96SQ5 575 aaPredicted RBP6.66□□□□□ -1.34
LDHB-209ENST00000542765 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
LDHB-209ENST00000542765 C1QTNF9BB2RNN3 333 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 EGFRP00533 1210 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 ATP2B4P23634 1241 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 ARSDP51689 593 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 FAM26DQ5JW98 314 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 C8orf86Q6ZUL3 223 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 CD163Q86VB7 1156 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 IFT43Q96FT9 208 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 SAP130Q9H0E3 1048 aa6.65□□□□□ -1.34
LDHB-209ENST00000542765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.65□□□□□ -1.34
LDHB-209ENST00000542765 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.65□□□□□ -1.34
LDHB-209ENST00000542765 CHRNA4P43681 627 aa6.64□□□□□ -1.35
LDHB-209ENST00000542765 ETFBKMTQ8IXQ9 262 aa6.64□□□□□ -1.35
LDHB-209ENST00000542765 VTI1AQ96AJ9 217 aa6.64□□□□□ -1.35
LDHB-209ENST00000542765 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms