RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	SLX4	Q8IY92	1834 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	BBOX1	O75936	387 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	NTSR2	O95665	410 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	POTEI	P0CG38	1075 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	POTEJ	P0CG39	1038 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	EPHX2	P34913	555 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	DDX10	Q13206	875 aa	Known RBP	13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	EAPP	Q56P03	285 aa	Predicted RBP	13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	VPS33B	Q9H267	617 aa		13.92	□□□□□ -0.18
ARAP1-215	ENST00000542264	RNF123	Q5XPI4	1314 aa		13.91	□□□□□ -0.18
ARAP1-215	ENST00000542264	UBN2	Q6ZU65	1347 aa		13.91	□□□□□ -0.18
ARAP1-215	ENST00000542264	CHL1	O00533	1208 aa		13.91	□□□□□ -0.18
ARAP1-215	ENST00000542264	LRP10	Q7Z4F1	713 aa		13.91	□□□□□ -0.18
ARAP1-215	ENST00000542264	LARGE2	Q8N3Y3	721 aa		13.91	□□□□□ -0.18
ARAP1-215	ENST00000542264	ZNF541	Q9H0D2	1346 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	TMEM88B	A6NKF7	163 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	PPEF1	O14829	653 aa	Predicted RBP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	ITGBL1	O95965	494 aa	Predicted RBP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	HSPA1A	P0DMV8	641 aa	Known RBP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	HSPA1B	P0DMV9	641 aa	Known RBP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	WDR43	Q15061	677 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	NEUROD2	Q15784	382 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	COPS6	Q7L5N1	327 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	RUNDC1	Q96C34	613 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	ATP6V0A2	Q9Y487	856 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	ABCC12	Q96J65	1359 aa		13.9	□□□□□ -0.18
ARAP1-215	ENST00000542264	RIC1	Q4ADV7	1423 aa		13.9	□□□□□ -0.19
ARAP1-215	ENST00000542264	PASK	Q96RG2	1323 aa		13.9	□□□□□ -0.19
ARAP1-215	ENST00000542264	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.9	□□□□□ -0.19
ARAP1-215	ENST00000542264	FER1L6	Q2WGJ9	1857 aa		13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	TCERG1	O14776	1098 aa	Known RBP	13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	LMOD1	P29536	600 aa	Predicted RBP	13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	AIMP1	Q12904	312 aa	Known RBP	13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	TCIRG1	Q13488	830 aa		13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	CNTROB	Q8N137	903 aa		13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	SUPT20H	Q8NEM7	779 aa		13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	MKRN1	Q9UHC7	482 aa	Known RBP	13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	GJA3	Q9Y6H8	435 aa		13.89	□□□□□ -0.19
ARAP1-215	ENST00000542264	PROSER3	Q2NL68	480 aa		13.88	□□□□□ -0.19
ARAP1-215	ENST00000542264	NIM1K	Q8IY84	436 aa		13.88	□□□□□ -0.19
ARAP1-215	ENST00000542264	TNS4	Q8IZW8	715 aa		13.88	□□□□□ -0.19
ARAP1-215	ENST00000542264	XAGE3	Q8WTP9	111 aa		13.88	□□□□□ -0.19
ARAP1-215	ENST00000542264	LAS1L	Q9Y4W2	734 aa	Known RBP	13.88	□□□□□ -0.19
ARAP1-215	ENST00000542264	COL11A2	P13942	1736 aa	Predicted RBP	13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	SLC34A2	O95436	690 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	ANXA1	P04083	346 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	HOXB7	P09629	217 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	C3orf67	Q6ZVT6	689 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	NLRP10	Q86W26	655 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	SP8	Q8IXZ3	490 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	CCDC146	Q8IYE0	955 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	NECTIN2	Q92692	538 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	TRMT112	Q9UI30	125 aa	Known RBP	13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	SH3TC1	Q8TE82	1336 aa		13.87	□□□□□ -0.19
ARAP1-215	ENST00000542264	BCOR	Q6W2J9	1755 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	PPIP5K2	O43314	1243 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	MAP1S	Q66K74	1059 aa	Predicted RBP	13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	ANKRD13D	Q6ZTN6	518 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	USP50	Q70EL3	339 aa	Predicted RBP	13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	DDX46	Q7L014	1031 aa	Known RBP	13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	TMC4	Q7Z404	712 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	DBF4	Q9UBU7	674 aa	Predicted RBP	13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	ZNRF3	Q9ULT6	936 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	ADAMTS8	Q9UP79	889 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	TRIM35	Q9UPQ4	493 aa		13.86	□□□□□ -0.19
ARAP1-215	ENST00000542264	CNTNAP1	P78357	1384 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	CCDC88A	Q3V6T2	1871 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	HCLS1	P14317	486 aa	Predicted RBP	13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	HDGFL1	Q5TGJ6	251 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	DPP8	Q6V1X1	898 aa	Predicted RBP	13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	MPND	Q8N594	471 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	PLBD2	Q8NHP8	589 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	CFAP44	Q96MT7	982 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	HYPK	Q9NX55	129 aa		13.85	□□□□□ -0.19
ARAP1-215	ENST00000542264	DICER1	Q9UPY3	1922 aa	Known RBP	13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	SNED1	Q8TER0	1413 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	VEGFB	P49765	207 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	DEFB115	Q30KQ5	88 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	CHMP4A	Q9BY43	222 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	ABCC4	O15439	1325 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	TIAM2	Q8IVF5	1701 aa		13.84	□□□□□ -0.19
ARAP1-215	ENST00000542264	EPS15	P42566	896 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	SCNN1D	P51172	638 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	CALD1	Q05682	793 aa	Known RBP	13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	GRAP	Q13588	217 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	TNIP1	Q15025	636 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	AOC3	Q16853	763 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	GRAPL	Q8TC17	118 aa	Predicted RBP	13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	AIDA	Q96BJ3	306 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	CHPF2	Q9P2E5	772 aa		13.83	□□□□□ -0.2
ARAP1-215	ENST00000542264	RASSF10	A6NK89	507 aa		13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	HSP90B1	P14625	803 aa	Known RBP	13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	CXCL9	Q07325	125 aa		13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	TRIM28	Q13263	835 aa	Known RBP	13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	KRT24	Q2M2I5	525 aa		13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	ADARB2	Q9NS39	739 aa	Known RBP	13.82	□□□□□ -0.2
ARAP1-215	ENST00000542264	CTCF	P49711	727 aa	Predicted RBP	13.81	□□□□□ -0.2
ARAP1-215	ENST00000542264	KIAA2012	Q0VF49	1180 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms