RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 ERVV-1B6SEH8 477 aa20.67■□□□□ 0.9
CD4-210ENST00000541982 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
CD4-210ENST00000541982 SNED1Q8TER0 1413 aa20.67■□□□□ 0.9
CD4-210ENST00000541982 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
CD4-210ENST00000541982 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
CD4-210ENST00000541982 PAXIP1Q6ZW49 1069 aaPredicted RBP20.66■□□□□ 0.9
CD4-210ENST00000541982 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
CD4-210ENST00000541982 LARGE2Q8N3Y3 721 aa20.66■□□□□ 0.9
CD4-210ENST00000541982 CAPNS2Q96L46 248 aa20.66■□□□□ 0.9
CD4-210ENST00000541982 LAMB4A4D0S4 1761 aa20.66■□□□□ 0.9
CD4-210ENST00000541982 NUP98P52948 1817 aa20.66■□□□□ 0.9
CD4-210ENST00000541982 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
CD4-210ENST00000541982 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.9
CD4-210ENST00000541982 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.89
CD4-210ENST00000541982 SLC34A2O95436 690 aa20.64■□□□□ 0.89
CD4-210ENST00000541982 SCNN1DP51172 638 aa20.64■□□□□ 0.89
CD4-210ENST00000541982 KIF6Q6ZMV9 814 aa20.64■□□□□ 0.89
CD4-210ENST00000541982 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
CD4-210ENST00000541982 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
CD4-210ENST00000541982 GPR101Q96P66 508 aaPredicted RBP20.64■□□□□ 0.89
CD4-210ENST00000541982 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
CD4-210ENST00000541982 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
CD4-210ENST00000541982 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 EPS15P42566 896 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 DCTN1Q14203 1278 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 FAM161AQ3B820 660 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 NIM1KQ8IY84 436 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 CRAMP1Q96RY5 1269 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
CD4-210ENST00000541982 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
CD4-210ENST00000541982 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
CD4-210ENST00000541982 PPEF1O14829 653 aaPredicted RBP20.61■□□□□ 0.89
CD4-210ENST00000541982 MAP2K2P36507 400 aa20.61■□□□□ 0.89
CD4-210ENST00000541982 CYP4F22Q6NT55 531 aa20.61■□□□□ 0.89
CD4-210ENST00000541982 VPS33BQ9H267 617 aa20.61■□□□□ 0.89
CD4-210ENST00000541982 TLL2Q9Y6L7 1015 aa20.61■□□□□ 0.89
CD4-210ENST00000541982 COL4A5P29400 1685 aa20.61■□□□□ 0.89
CD4-210ENST00000541982 CCDC85CA6NKD9 419 aa20.6■□□□□ 0.89
CD4-210ENST00000541982 GRM1Q13255 1194 aa20.6■□□□□ 0.89
CD4-210ENST00000541982 NEFMP07197 916 aa20.59■□□□□ 0.89
CD4-210ENST00000541982 MLLT1Q03111 559 aaPredicted RBP20.59■□□□□ 0.89
CD4-210ENST00000541982 CST9Q5W186 159 aa20.59■□□□□ 0.89
CD4-210ENST00000541982 ADARB2Q9NS39 739 aaKnown RBP20.59■□□□□ 0.89
CD4-210ENST00000541982 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
CD4-210ENST00000541982 PPIP5K2O43314 1243 aa20.58■□□□□ 0.89
CD4-210ENST00000541982 CA12O43570 354 aa20.58■□□□□ 0.89
CD4-210ENST00000541982 GPTP24298 496 aa20.58■□□□□ 0.89
CD4-210ENST00000541982 PPP2R1AP30153 589 aa20.58■□□□□ 0.89
CD4-210ENST00000541982 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
CD4-210ENST00000541982 MIS18AQ9NYP9 233 aa20.58■□□□□ 0.89
CD4-210ENST00000541982 TRAF5O00463 557 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 RGS19P49795 217 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 SUSD4Q5VX71 490 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 TTLL7Q6ZT98 887 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 PPP1R42Q7Z4L9 355 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 GPRC5DQ9NZD1 345 aa20.57■□□□□ 0.88
CD4-210ENST00000541982 UBN2Q6ZU65 1347 aa20.56■□□□□ 0.88
CD4-210ENST00000541982 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
CD4-210ENST00000541982 HHIPL1Q96JK4 782 aa20.56■□□□□ 0.88
CD4-210ENST00000541982 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
CD4-210ENST00000541982 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
CD4-210ENST00000541982 MYL6BP14649 208 aa20.55■□□□□ 0.88
CD4-210ENST00000541982 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
CD4-210ENST00000541982 ZNF34Q8IZ26 560 aa20.55■□□□□ 0.88
CD4-210ENST00000541982 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
CD4-210ENST00000541982 ATP6V0A2Q9Y487 856 aa20.55■□□□□ 0.88
CD4-210ENST00000541982 CELF2O95319 508 aaKnown RBP20.54■□□□□ 0.88
CD4-210ENST00000541982 NTSR2O95665 410 aa20.54■□□□□ 0.88
CD4-210ENST00000541982 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
CD4-210ENST00000541982 AOC3Q16853 763 aa20.54■□□□□ 0.88
CD4-210ENST00000541982 GIGYF2Q6Y7W6 1299 aaKnown RBP20.54■□□□□ 0.88
CD4-210ENST00000541982 SAPCD2Q86UD0 394 aa20.54■□□□□ 0.88
CD4-210ENST00000541982 ZNRF3Q9ULT6 936 aa20.54■□□□□ 0.88
CD4-210ENST00000541982 DLG5Q8TDM6 1919 aa20.54■□□□□ 0.88
CD4-210ENST00000541982 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
CD4-210ENST00000541982 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
CD4-210ENST00000541982 AOC2O75106 756 aa20.53■□□□□ 0.88
CD4-210ENST00000541982 BRPF1P55201 1214 aaPredicted RBP20.52■□□□□ 0.88
CD4-210ENST00000541982 CXCL9Q07325 125 aa20.52■□□□□ 0.88
CD4-210ENST00000541982 ZC3H15Q8WU90 426 aaKnown RBP20.52■□□□□ 0.88
CD4-210ENST00000541982 RTFDC1Q9BY42 306 aaPredicted RBP20.52■□□□□ 0.88
CD4-210ENST00000541982 PGAP2Q9UHJ9 254 aa20.51■□□□□ 0.87
CD4-210ENST00000541982 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
CD4-210ENST00000541982 CASP8AP2Q9UKL3 1982 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 BBOX1O75936 387 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 GMPSP49915 693 aaPredicted RBP20.5■□□□□ 0.87
CD4-210ENST00000541982 TNIP1Q15025 636 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 CIAPIN1Q6FI81 312 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 DPP8Q6V1X1 898 aaPredicted RBP20.5■□□□□ 0.87
CD4-210ENST00000541982 UTP14AQ9BVJ6 771 aaKnown RBP20.5■□□□□ 0.87
CD4-210ENST00000541982 BCL2L13Q9BXK5 485 aa20.5■□□□□ 0.87
CD4-210ENST00000541982 C3orf67Q6ZVT6 689 aa20.49■□□□□ 0.87
CD4-210ENST00000541982 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
CD4-210ENST00000541982 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
CD4-210ENST00000541982 GLIS2Q9BZE0 524 aaPredicted RBP20.49■□□□□ 0.87
CD4-210ENST00000541982 MPNDQ8N594 471 aa20.48■□□□□ 0.87
CD4-210ENST00000541982 CFAP44Q96MT7 982 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms