RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 COL8A1P27658 744 aa8.5□□□□□ -1.05
SOX9-AS1-214ENST00000540802 TNFRSF25Q93038 417 aa8.5□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
SOX9-AS1-214ENST00000540802 GNB5O14775 395 aa8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ITGB2P05107 769 aa8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 SWI5Q1ZZU3 235 aa8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
SOX9-AS1-214ENST00000540802 PIK3R2O00459 728 aa8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ATG7O95352 703 aa8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 PLA2G4EQ3MJ16 856 aa8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 MYO19Q96H55 970 aa8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
SOX9-AS1-214ENST00000540802 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 ALAS2P22557 587 aa8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 GPAT2Q6NUI2 795 aa8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
SOX9-AS1-214ENST00000540802 KRBA1A5PL33 1030 aa8.46□□□□□ -1.06
SOX9-AS1-214ENST00000540802 RAB44Q7Z6P3 723 aaPredicted RBP8.46□□□□□ -1.06
SOX9-AS1-214ENST00000540802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.46□□□□□ -1.06
SOX9-AS1-214ENST00000540802 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
SOX9-AS1-214ENST00000540802 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 INPP5BP32019 993 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 DGKZQ13574 1117 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 OCLNQ16625 522 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 C11orf91Q3C1V1 193 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
SOX9-AS1-214ENST00000540802 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
SOX9-AS1-214ENST00000540802 STK32AQ8WU08 396 aa8.44□□□□□ -1.06
SOX9-AS1-214ENST00000540802 LRFN2Q9ULH4 789 aa8.44□□□□□ -1.06
SOX9-AS1-214ENST00000540802 ADH7P40394 386 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 IDH3AP50213 366 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 BHMTQ93088 406 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 CCDC97Q96F63 343 aaPredicted RBP8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
SOX9-AS1-214ENST00000540802 MSTNO14793 375 aa8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PRMT3O60678 531 aa8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 MICAL2O94851 1124 aa8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 CCINQ13939 588 aa8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 COL9A3Q14050 684 aaPredicted RBP8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
SOX9-AS1-214ENST00000540802 OPLAHO14841 1288 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PROCP04070 461 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 COX20Q5RI15 118 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 TMEM164Q5U3C3 297 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 MICALL1Q8N3F8 863 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 COL26A1Q96A83 441 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
SOX9-AS1-214ENST00000540802 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 EPB42P16452 691 aa8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 ARSDP51689 593 aa8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 IFT43Q96FT9 208 aa8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 PLVAPQ9BX97 442 aa8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 CXXC1Q9P0U4 656 aaPredicted RBP8.4□□□□□ -1.06
SOX9-AS1-214ENST00000540802 M0R082 166 aa8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ALBP02768 609 aa8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 CLP1Q92989 425 aaKnown RBP8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
SOX9-AS1-214ENST00000540802 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
SOX9-AS1-214ENST00000540802 NFKB1P19838 968 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SUZ12Q15022 739 aaKnown RBP8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SAP130Q9H0E3 1048 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 DNAJB12Q9NXW2 375 aaKnown RBP8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SLC6A14Q9UN76 642 aa8.37□□□□□ -1.07
SOX9-AS1-214ENST00000540802 C1QTNF9BB2RNN3 333 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 EGFRP00533 1210 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 NID1P14543 1247 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 C16orf46Q6P387 395 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 TREML1Q86YW5 311 aa8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SOX9-AS1-214ENST00000540802 TARSP26639 723 aaKnown RBP8.35□□□□□ -1.07
SOX9-AS1-214ENST00000540802 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 SPATA31C1P0DKV0 1188 aa8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ETFBKMTQ8IXQ9 262 aa8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
SOX9-AS1-214ENST00000540802 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms