RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PDZRN3Q9UPQ7 1066 aa24.78■■□□□ 1.56
DDX55-207ENST00000540763 NPHP1O15259 732 aa24.77■■□□□ 1.56
DDX55-207ENST00000540763 NEXNQ0ZGT2 675 aa24.77■■□□□ 1.56
DDX55-207ENST00000540763 SUSD4Q5VX71 490 aa24.77■■□□□ 1.56
DDX55-207ENST00000540763 BRIP1Q9BX63 1249 aa24.77■■□□□ 1.56
DDX55-207ENST00000540763 TNRC6CQ9HCJ0 1690 aaKnown RBP24.76■■□□□ 1.55
DDX55-207ENST00000540763 DDX60Q8IY21 1712 aaKnown RBP24.76■■□□□ 1.55
DDX55-207ENST00000540763 CCDC191Q8NCU4 936 aa24.76■■□□□ 1.55
DDX55-207ENST00000540763 DNAAF4Q8WXU2 420 aa24.76■■□□□ 1.55
DDX55-207ENST00000540763 UTP14AQ9BVJ6 771 aaKnown RBP24.76■■□□□ 1.55
DDX55-207ENST00000540763 MYD88Q99836 296 aa24.75■■□□□ 1.55
DDX55-207ENST00000540763 KIF16BQ96L93 1317 aa24.75■■□□□ 1.55
DDX55-207ENST00000540763 PDE6BP35913 854 aa24.74■■□□□ 1.55
DDX55-207ENST00000540763 BCL2L13Q9BXK5 485 aa24.74■■□□□ 1.55
DDX55-207ENST00000540763 ARFGEF1Q9Y6D6 1849 aa24.74■■□□□ 1.55
DDX55-207ENST00000540763 GTF2E1P29083 439 aaPredicted RBP24.73■■□□□ 1.55
DDX55-207ENST00000540763 ABCC12Q96J65 1359 aa24.72■■□□□ 1.55
DDX55-207ENST00000540763 ATP5J2-PTCD1G3V325 749 aa24.72■■□□□ 1.55
DDX55-207ENST00000540763 MYH3P11055 1940 aa24.72■■□□□ 1.55
DDX55-207ENST00000540763 GOLGB1Q14789 3259 aaKnown RBP24.72■■□□□ 1.55
DDX55-207ENST00000540763 SH3TC1Q8TE82 1336 aa24.71■■□□□ 1.55
DDX55-207ENST00000540763 FAM177BA6PVY3 158 aa24.71■■□□□ 1.55
DDX55-207ENST00000540763 IGKV5-2P06315 115 aa24.71■■□□□ 1.55
DDX55-207ENST00000540763 LINS1Q8NG48 757 aa24.71■■□□□ 1.55
DDX55-207ENST00000540763 CWC25Q9NXE8 425 aaPredicted RBP24.71■■□□□ 1.55
DDX55-207ENST00000540763 TRMT112Q9UI30 125 aaKnown RBP24.71■■□□□ 1.55
DDX55-207ENST00000540763 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.54
DDX55-207ENST00000540763 GRIN3BO60391 1043 aa24.7■■□□□ 1.54
DDX55-207ENST00000540763 C1QTNF8P60827 252 aa24.7■■□□□ 1.54
DDX55-207ENST00000540763 SLC10A5Q5PT55 438 aa24.7■■□□□ 1.54
DDX55-207ENST00000540763 NUTM1Q86Y26 1132 aa24.7■■□□□ 1.54
DDX55-207ENST00000540763 CACNA1SQ13698 1873 aa24.69■■□□□ 1.54
DDX55-207ENST00000540763 NEURL1BA8MQ27 555 aa24.69■■□□□ 1.54
DDX55-207ENST00000540763 ERFEQ4G0M1 354 aa24.69■■□□□ 1.54
DDX55-207ENST00000540763 ARHGAP45Q92619 1136 aa24.69■■□□□ 1.54
DDX55-207ENST00000540763 F6X3S4 739 aa24.68■■□□□ 1.54
DDX55-207ENST00000540763 PCCAP05165 728 aaPredicted RBP24.68■■□□□ 1.54
DDX55-207ENST00000540763 DPEP1P16444 411 aa24.68■■□□□ 1.54
DDX55-207ENST00000540763 YBX3P16989 372 aaKnown RBP eCLIP24.68■■□□□ 1.54
DDX55-207ENST00000540763 ZBTB38Q8NAP3 1195 aaPredicted RBP24.68■■□□□ 1.54
DDX55-207ENST00000540763 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
DDX55-207ENST00000540763 H0YIN7 160 aa24.67■■□□□ 1.54
DDX55-207ENST00000540763 HSP90B1P14625 803 aaKnown RBP24.67■■□□□ 1.54
DDX55-207ENST00000540763 BEND3Q5T5X7 828 aa24.67■■□□□ 1.54
DDX55-207ENST00000540763 API5Q9BZZ5 524 aaKnown RBP24.67■■□□□ 1.54
DDX55-207ENST00000540763 CDHR2Q9BYE9 1310 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 A0A0G2JLW4 131 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 ALDH1L1O75891 902 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 KCNA3P22001 575 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 CWF19L2Q2TBE0 894 aaKnown RBP24.66■■□□□ 1.54
DDX55-207ENST00000540763 CRY2Q49AN0 593 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 C2CD5Q86YS7 1000 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 CCDC24Q8N4L8 307 aa24.66■■□□□ 1.54
DDX55-207ENST00000540763 NOB1Q9ULX3 412 aaKnown RBP24.66■■□□□ 1.54
DDX55-207ENST00000540763 IPO8O15397 1037 aaKnown RBP24.65■■□□□ 1.54
DDX55-207ENST00000540763 SRGNP10124 158 aa24.65■■□□□ 1.54
DDX55-207ENST00000540763 CHRNA5P30532 468 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 GCKRQ14397 625 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 STYK1Q6J9G0 422 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 FAM89AQ96GI7 184 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 NLRP3Q96P20 1036 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 PIM2Q9P1W9 311 aa24.64■■□□□ 1.54
DDX55-207ENST00000540763 BCAR3O75815 825 aa24.63■■□□□ 1.53
DDX55-207ENST00000540763 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
DDX55-207ENST00000540763 SRCIN1Q9C0H9 1055 aa24.63■■□□□ 1.53
DDX55-207ENST00000540763 NPR1P16066 1061 aa24.62■■□□□ 1.53
DDX55-207ENST00000540763 SLC4A10Q6U841 1118 aa24.62■■□□□ 1.53
DDX55-207ENST00000540763 H7C1W4 665 aa24.61■■□□□ 1.53
DDX55-207ENST00000540763 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
DDX55-207ENST00000540763 SYNE4Q8N205 404 aa24.6■■□□□ 1.53
DDX55-207ENST00000540763 CNKSR1Q969H4 720 aa24.6■■□□□ 1.53
DDX55-207ENST00000540763 SLX4Q8IY92 1834 aa24.6■■□□□ 1.53
DDX55-207ENST00000540763 ABCC4O15439 1325 aa24.6■■□□□ 1.53
DDX55-207ENST00000540763 HOXA10P31260 410 aaPredicted RBP24.59■■□□□ 1.53
DDX55-207ENST00000540763 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
DDX55-207ENST00000540763 DALRD3Q5D0E6 543 aaKnown RBP24.59■■□□□ 1.53
DDX55-207ENST00000540763 ATF7IPQ6VMQ6 1270 aa24.59■■□□□ 1.53
DDX55-207ENST00000540763 TTLL6Q8N841 843 aa24.59■■□□□ 1.53
DDX55-207ENST00000540763 RCAN3Q9UKA8 241 aa24.59■■□□□ 1.53
DDX55-207ENST00000540763 PDE8AO60658 829 aa24.58■■□□□ 1.53
DDX55-207ENST00000540763 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
DDX55-207ENST00000540763 ZKSCAN2Q63HK3 967 aa24.58■■□□□ 1.53
DDX55-207ENST00000540763 GRM8O00222 908 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 TRIM27P14373 513 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 ALDH1B1P30837 517 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 CASP7P55210 303 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 SF3B3Q15393 1217 aaKnown RBP24.57■■□□□ 1.52
DDX55-207ENST00000540763 UBE3BQ7Z3V4 1068 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 RPGRQ92834 1020 aaKnown RBP24.57■■□□□ 1.52
DDX55-207ENST00000540763 ZNF622Q969S3 477 aaKnown RBP eCLIP24.57■■□□□ 1.521e-12■■□□□ 12.7
DDX55-207ENST00000540763 PLA2G12BQ9BX93 195 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 UTYO14607 1347 aa24.57■■□□□ 1.52
DDX55-207ENST00000540763 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
DDX55-207ENST00000540763 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
DDX55-207ENST00000540763 FRAT1Q92837 279 aaPredicted RBP24.56■■□□□ 1.52
DDX55-207ENST00000540763 CRAMP1Q96RY5 1269 aa24.56■■□□□ 1.52
DDX55-207ENST00000540763 RBM17Q96I25 401 aaKnown RBP24.55■■□□□ 1.52
DDX55-207ENST00000540763 BCS1LQ9Y276 419 aa24.55■■□□□ 1.52
DDX55-207ENST00000540763 FER1L6Q2WGJ9 1857 aa24.54■■□□□ 1.52
DDX55-207ENST00000540763 INTS3Q68E01 1043 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms