RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 AK2P54819 239 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 PTPN12Q05209 780 aaKnown RBP25.27■■□□□ 1.64
LSM14A-202ENST00000540746 RABL6Q3YEC7 729 aaPredicted RBP25.27■■□□□ 1.64
LSM14A-202ENST00000540746 GPT2Q8TD30 523 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 PCDH11XQ9BZA7 1347 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 PCDH11YQ9BZA8 1340 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 STRCQ7RTU9 1775 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 RUFY3Q7L099 469 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 PLBD2Q8NHP8 589 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 LARP6Q9BRS8 491 aaKnown RBP25.27■■□□□ 1.64
LSM14A-202ENST00000540746 BOLA2Q9H3K6 86 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
LSM14A-202ENST00000540746 UBR2Q8IWV8 1755 aa25.26■■□□□ 1.64
LSM14A-202ENST00000540746 CASP7P55210 303 aa25.26■■□□□ 1.63
LSM14A-202ENST00000540746 CAVIN1Q6NZI2 390 aaKnown RBP25.26■■□□□ 1.63
LSM14A-202ENST00000540746 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
LSM14A-202ENST00000540746 COL15A1P39059 1388 aa25.25■■□□□ 1.63
LSM14A-202ENST00000540746 A0A087WZG4 1122 aa25.25■■□□□ 1.63
LSM14A-202ENST00000540746 NMIQ13287 307 aaPredicted RBP25.25■■□□□ 1.63
LSM14A-202ENST00000540746 ADCK5Q3MIX3 580 aa25.25■■□□□ 1.63
LSM14A-202ENST00000540746 NCLP19338 710 aaKnown RBP25.25■■□□□ 1.63
LSM14A-202ENST00000540746 PRPF40BQ6NWY9 871 aaKnown RBP25.25■■□□□ 1.63
LSM14A-202ENST00000540746 KCNB2Q92953 911 aa25.25■■□□□ 1.63
LSM14A-202ENST00000540746 CCDC171Q6TFL3 1326 aa25.24■■□□□ 1.63
LSM14A-202ENST00000540746 CASTP20810 708 aaKnown RBP25.24■■□□□ 1.63
LSM14A-202ENST00000540746 NECTIN1Q15223 517 aa25.24■■□□□ 1.63
LSM14A-202ENST00000540746 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
LSM14A-202ENST00000540746 ABCA3Q99758 1704 aa25.23■■□□□ 1.63
LSM14A-202ENST00000540746 KCPQ6ZWJ8 1503 aa25.23■■□□□ 1.63
LSM14A-202ENST00000540746 A0A0D9SFI3 127 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 ZSCAN23Q3MJ62 389 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
LSM14A-202ENST00000540746 ERVV-2B6SEH9 535 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 TFCP2Q12800 502 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 TTLL7Q6ZT98 887 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 SNRKQ9NRH2 765 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 DBNLQ9UJU6 430 aaKnown RBP25.22■■□□□ 1.63
LSM14A-202ENST00000540746 NSFL1CQ9UNZ2 370 aaKnown RBP25.22■■□□□ 1.63
LSM14A-202ENST00000540746 LIMCH1Q9UPQ0 1083 aa25.22■■□□□ 1.63
LSM14A-202ENST00000540746 ZNF445P59923 1031 aa25.21■■□□□ 1.63
LSM14A-202ENST00000540746 NKX1-1Q15270 411 aaPredicted RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 NUP188Q5SRE5 1749 aa25.21■■□□□ 1.63
LSM14A-202ENST00000540746 MAP4K1Q92918 833 aa25.21■■□□□ 1.63
LSM14A-202ENST00000540746 EDC3Q96F86 508 aaKnown RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 JAKMIP1Q96N16 626 aaKnown RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 RBM27Q9P2N5 1060 aaKnown RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 RBM8AQ9Y5S9 174 aaKnown RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 RPAP1Q9BWH6 1393 aaPredicted RBP25.21■■□□□ 1.63
LSM14A-202ENST00000540746 PAPPAQ13219 1627 aa25.21■■□□□ 1.63
LSM14A-202ENST00000540746 ERBB4Q15303 1308 aa25.2■■□□□ 1.63
LSM14A-202ENST00000540746 HIP1O00291 1037 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 LARGE1O95461 756 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 A1BGP04217 495 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 TNNI3KQ59H18 835 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 FSD1Q9BTV5 496 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 ZSWIM6Q9HCJ5 1215 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 RRAGDQ9NQL2 400 aaPredicted RBP25.2■■□□□ 1.62
LSM14A-202ENST00000540746 FPGT-TNNI3KV9GXZ4 949 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 IL2RBP14784 551 aa25.2■■□□□ 1.62
LSM14A-202ENST00000540746 TCHHQ07283 1943 aa25.19■■□□□ 1.62
LSM14A-202ENST00000540746 DDX54Q8TDD1 881 aaKnown RBP25.19■■□□□ 1.62
LSM14A-202ENST00000540746 CARD10Q9BWT7 1032 aa25.19■■□□□ 1.62
LSM14A-202ENST00000540746 FOXO4P98177 505 aa25.18■■□□□ 1.62
LSM14A-202ENST00000540746 COL9A3Q14050 684 aaPredicted RBP25.18■■□□□ 1.62
LSM14A-202ENST00000540746 TM6SF1Q9BZW5 370 aa25.18■■□□□ 1.62
LSM14A-202ENST00000540746 H7C1W4 665 aa25.18■■□□□ 1.62
LSM14A-202ENST00000540746 CREB3L3Q68CJ9 461 aa25.18■■□□□ 1.62
LSM14A-202ENST00000540746 LMBR1LQ6UX01 489 aa25.18■■□□□ 1.62
LSM14A-202ENST00000540746 MED23Q9ULK4 1368 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 VPS53Q5VIR6 699 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 TJP1Q07157 1748 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 ATP5JP18859 108 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 PDRG1Q9NUG6 133 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 TMEM63CQ9P1W3 806 aa25.17■■□□□ 1.62
LSM14A-202ENST00000540746 FOXD4L6Q3SYB3 417 aaPredicted RBP25.16■■□□□ 1.62
LSM14A-202ENST00000540746 FOXD4L3Q6VB84 417 aaPredicted RBP25.16■■□□□ 1.62
LSM14A-202ENST00000540746 ZNF589Q86UQ0 364 aaPredicted RBP25.16■■□□□ 1.62
LSM14A-202ENST00000540746 NDUFB9Q9Y6M9 179 aa25.16■■□□□ 1.62
LSM14A-202ENST00000540746 WDR33Q9C0J8 1336 aaKnown RBP25.16■■□□□ 1.62
LSM14A-202ENST00000540746 CYP46A1Q9Y6A2 500 aa25.15■■□□□ 1.62
LSM14A-202ENST00000540746 DBNDD2Q9BQY9 259 aa25.15■■□□□ 1.62
LSM14A-202ENST00000540746 TNS2Q63HR2 1409 aa25.14■■□□□ 1.62
LSM14A-202ENST00000540746 SLC27A2O14975 620 aa25.14■■□□□ 1.62
LSM14A-202ENST00000540746 ZKSCAN1P17029 563 aaPredicted RBP25.14■■□□□ 1.62
LSM14A-202ENST00000540746 TAF6LQ9Y6J9 622 aa25.14■■□□□ 1.62
LSM14A-202ENST00000540746 TOGARAM1Q9Y4F4 1720 aa25.14■■□□□ 1.61
LSM14A-202ENST00000540746 ZBTB3Q9H5J0 574 aa25.14■■□□□ 1.61
LSM14A-202ENST00000540746 DTNBO60941 627 aa25.13■■□□□ 1.61
LSM14A-202ENST00000540746 KCNJ4P48050 445 aa25.13■■□□□ 1.61
LSM14A-202ENST00000540746 CWC25Q9NXE8 425 aaPredicted RBP25.13■■□□□ 1.61
LSM14A-202ENST00000540746 JCADQ9P266 1359 aa25.13■■□□□ 1.61
LSM14A-202ENST00000540746 NASPP49321 788 aaPredicted RBP25.12■■□□□ 1.61
LSM14A-202ENST00000540746 ST3GAL1Q11201 340 aa25.12■■□□□ 1.61
LSM14A-202ENST00000540746 GDPD2Q9HCC8 539 aa25.12■■□□□ 1.61
LSM14A-202ENST00000540746 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.12■■□□□ 1.61
LSM14A-202ENST00000540746 CHGBP05060 677 aa25.12■■□□□ 1.61
LSM14A-202ENST00000540746 ATG9AQ7Z3C6 839 aa25.12■■□□□ 1.61
LSM14A-202ENST00000540746 SYT1P21579 422 aa25.11■■□□□ 1.61
LSM14A-202ENST00000540746 PRIM1P49642 420 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms