RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 IL17RAQ96F46 866 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 MYD88Q99836 296 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 SYCE3A1L190 88 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 TRIM44Q96DX7 344 aaPredicted RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 TTC41PQ6P2S7 1318 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 LARGE1O95461 756 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 CASTP20810 708 aaKnown RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 COL9A3Q14050 684 aaPredicted RBP13.91□□□□□ -0.18
C11orf54-214ENST00000540113 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
C11orf54-214ENST00000540113 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 UBR2Q8IWV8 1755 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 GADD45BO75293 160 aaPredicted RBP13.9□□□□□ -0.18
C11orf54-214ENST00000540113 ZNF445P59923 1031 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 TTC5Q8N0Z6 440 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 METTL22Q9BUU2 404 aaPredicted RBP13.9□□□□□ -0.18
C11orf54-214ENST00000540113 CABP4P57796 275 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.18
C11orf54-214ENST00000540113 GCKRQ14397 625 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
C11orf54-214ENST00000540113 TTC14Q96N46 770 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
C11orf54-214ENST00000540113 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
C11orf54-214ENST00000540113 ESPNB1AK53 854 aa13.89□□□□□ -0.19
C11orf54-214ENST00000540113 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
C11orf54-214ENST00000540113 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
C11orf54-214ENST00000540113 JAKMIP1Q96N16 626 aaKnown RBP13.89□□□□□ -0.19
C11orf54-214ENST00000540113 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
C11orf54-214ENST00000540113 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
C11orf54-214ENST00000540113 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
C11orf54-214ENST00000540113 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
C11orf54-214ENST00000540113 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
C11orf54-214ENST00000540113 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
C11orf54-214ENST00000540113 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
C11orf54-214ENST00000540113 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
C11orf54-214ENST00000540113 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
C11orf54-214ENST00000540113 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
C11orf54-214ENST00000540113 TCHHQ07283 1943 aa13.87□□□□□ -0.19
C11orf54-214ENST00000540113 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
C11orf54-214ENST00000540113 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
C11orf54-214ENST00000540113 GPATCH3Q96I76 525 aa13.87□□□□□ -0.19
C11orf54-214ENST00000540113 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
C11orf54-214ENST00000540113 CHGBP05060 677 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 CLCN1P35523 988 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 USP48Q86UV5 1035 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 CCDC83Q8IWF9 413 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 RNF214Q8ND24 703 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 TCEANC2Q96MN5 208 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 A0A0D9SFI3 127 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 NBPF10Q6P3W6 841 aaKnown RBP13.86□□□□□ -0.19
C11orf54-214ENST00000540113 NBPF15Q8N660 670 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
C11orf54-214ENST00000540113 EVI5LQ96CN4 794 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 TAF6LQ9Y6J9 622 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 TOGARAM1Q9Y4F4 1720 aa13.86□□□□□ -0.19
C11orf54-214ENST00000540113 KCNJ4P48050 445 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 TJP1Q07157 1748 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 NECAB1Q8N987 351 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 FSD1Q9BTV5 496 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 PDRG1Q9NUG6 133 aa13.85□□□□□ -0.19
C11orf54-214ENST00000540113 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
C11orf54-214ENST00000540113 SYT1P21579 422 aa13.84□□□□□ -0.19
C11orf54-214ENST00000540113 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-214ENST00000540113 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
C11orf54-214ENST00000540113 CCDC171Q6TFL3 1326 aa13.84□□□□□ -0.19
C11orf54-214ENST00000540113 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
C11orf54-214ENST00000540113 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
C11orf54-214ENST00000540113 RFX5P48382 616 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-214ENST00000540113 LRSAM1Q6UWE0 723 aa13.84□□□□□ -0.19
C11orf54-214ENST00000540113 ANP32BQ92688 251 aaKnown RBP13.84□□□□□ -0.19
C11orf54-214ENST00000540113 CASP7P55210 303 aa13.83□□□□□ -0.19
C11orf54-214ENST00000540113 TFCP2Q12800 502 aa13.83□□□□□ -0.19
C11orf54-214ENST00000540113 NECTIN1Q15223 517 aa13.83□□□□□ -0.19
C11orf54-214ENST00000540113 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.19
C11orf54-214ENST00000540113 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.19
C11orf54-214ENST00000540113 COL15A1P39059 1388 aa13.83□□□□□ -0.2
C11orf54-214ENST00000540113 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
C11orf54-214ENST00000540113 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-214ENST00000540113 ZNF589Q86UQ0 364 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-214ENST00000540113 CARD10Q9BWT7 1032 aa13.83□□□□□ -0.2
C11orf54-214ENST00000540113 STX6O43752 255 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms