RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 IFT43Q96FT9 208 aa9□□□□□ -0.97
MRE11-209ENST00000540013 HSH2DQ96JZ2 352 aa9□□□□□ -0.97
MRE11-209ENST00000540013 CEP63Q96MT8 703 aa9□□□□□ -0.97
MRE11-209ENST00000540013 NDFIP2Q9NV92 336 aa9□□□□□ -0.97
MRE11-209ENST00000540013 KLK14Q9P0G3 267 aa9□□□□□ -0.97
MRE11-209ENST00000540013 STIM2Q9P246 746 aa9□□□□□ -0.97
MRE11-209ENST00000540013 EGFL7Q9UHF1 273 aa9□□□□□ -0.97
MRE11-209ENST00000540013 KHNYNO15037 678 aaKnown RBP8.99□□□□□ -0.97
MRE11-209ENST00000540013 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
MRE11-209ENST00000540013 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
MRE11-209ENST00000540013 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
MRE11-209ENST00000540013 LRFN2Q9ULH4 789 aa8.99□□□□□ -0.97
MRE11-209ENST00000540013 BAZ1BQ9UIG0 1483 aaKnown RBP8.99□□□□□ -0.97
MRE11-209ENST00000540013 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
MRE11-209ENST00000540013 MROH2BQ7Z745 1585 aa8.99□□□□□ -0.97
MRE11-209ENST00000540013 BNIP3LO60238 219 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 MX2P20592 715 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 FGFR3P22607 806 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 TNP2Q05952 138 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 TYRO3Q06418 890 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 FAM182BQ5T319 152 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 CAPN12Q6ZSI9 719 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 ZNF280CQ8ND82 737 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 ABHD17AQ96GS6 310 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 SAP130Q9H0E3 1048 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 BRD7Q9NPI1 651 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 MBIPQ9NS73 344 aa8.98□□□□□ -0.97
MRE11-209ENST00000540013 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
MRE11-209ENST00000540013 DCDC2BA2VCK2 349 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 GPR25O00155 361 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 EFSO43281 561 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
MRE11-209ENST00000540013 ARSDP51689 593 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 ALKBH2Q6NS38 261 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
MRE11-209ENST00000540013 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
MRE11-209ENST00000540013 C11orf16Q9NQ32 467 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 IGSF5Q9NSI5 407 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
MRE11-209ENST00000540013 MICAL2O94851 1124 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 FAM13AO94988 1023 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 ABL1P00519 1130 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 MAP2K3P46734 347 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 KCNQ4P56696 695 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 FKBP4Q02790 459 aaKnown RBP eCLIP8.96□□□□□ -0.98
MRE11-209ENST00000540013 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
MRE11-209ENST00000540013 EFCC1Q9HA90 598 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 BCS1LQ9Y276 419 aa8.96□□□□□ -0.98
MRE11-209ENST00000540013 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
MRE11-209ENST00000540013 GMPRP36959 345 aa8.95□□□□□ -0.98
MRE11-209ENST00000540013 IDH3AP50213 366 aa8.95□□□□□ -0.98
MRE11-209ENST00000540013 TREML1Q86YW5 311 aa8.95□□□□□ -0.98
MRE11-209ENST00000540013 DMGDHQ9UI17 866 aaKnown RBP8.95□□□□□ -0.98
MRE11-209ENST00000540013 KCNH4Q9UQ05 1017 aa8.95□□□□□ -0.98
MRE11-209ENST00000540013 SRSF11Q05519 484 aaKnown RBP8.94□□□□□ -0.98
MRE11-209ENST00000540013 DNMT3AQ9Y6K1 912 aaPredicted RBP8.94□□□□□ -0.98
MRE11-209ENST00000540013 RPLP1P05386 114 aaKnown RBP8.93□□□□□ -0.98
MRE11-209ENST00000540013 BMP4P12644 408 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 NPR3P17342 541 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 INPP5BP32019 993 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 SCNN1AP37088 669 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 GAS6Q14393 721 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
MRE11-209ENST00000540013 GLYCTKQ8IVS8 523 aa8.93□□□□□ -0.98
MRE11-209ENST00000540013 AVENQ9NQS1 362 aaPredicted RBP8.93□□□□□ -0.98
MRE11-209ENST00000540013 ERCC6Q03468 1493 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 ICMTO60725 284 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 PCSK2P16519 638 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 ZAP70P43403 619 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 ETFBKMTQ8IXQ9 262 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 PIK3R5Q8WYR1 880 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 KLRG1Q96E93 195 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 CNTNAP3BQ96NU0 1288 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 CNTNAP3Q9BZ76 1288 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 PRR12Q9ULL5 1215 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 IVNS1ABPQ9Y6Y0 642 aa8.92□□□□□ -0.98
MRE11-209ENST00000540013 CD33P20138 364 aa8.91□□□□□ -0.98
MRE11-209ENST00000540013 SERPINB4P48594 390 aa8.91□□□□□ -0.98
MRE11-209ENST00000540013 FNDC3AQ9Y2H6 1198 aaKnown RBP8.91□□□□□ -0.98
MRE11-209ENST00000540013 IGF1RP08069 1367 aa8.9□□□□□ -0.98
MRE11-209ENST00000540013 H3BRB1 525 aa8.9□□□□□ -0.98
MRE11-209ENST00000540013 CANXP27824 592 aaKnown RBP8.9□□□□□ -0.98
MRE11-209ENST00000540013 ZNF211Q13398 564 aaPredicted RBP8.9□□□□□ -0.98
MRE11-209ENST00000540013 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.98
MRE11-209ENST00000540013 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
MRE11-209ENST00000540013 GDF2Q9UK05 429 aaPredicted RBP8.9□□□□□ -0.98
MRE11-209ENST00000540013 WIZO95785 1651 aa8.9□□□□□ -0.98
MRE11-209ENST00000540013 NESP48681 1621 aa8.9□□□□□ -0.99
MRE11-209ENST00000540013 RBM47A0AV96 593 aaKnown RBP8.89□□□□□ -0.99
MRE11-209ENST00000540013 ARAFP10398 606 aa8.89□□□□□ -0.99
MRE11-209ENST00000540013 MPSTP25325 297 aa8.89□□□□□ -0.99
MRE11-209ENST00000540013 EIF1AXP47813 144 aaKnown RBP8.89□□□□□ -0.99
MRE11-209ENST00000540013 SPEM2Q0P670 501 aa8.89□□□□□ -0.99
MRE11-209ENST00000540013 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
MRE11-209ENST00000540013 AAMPQ13685 434 aa8.89□□□□□ -0.99
MRE11-209ENST00000540013 TTC16Q8NEE8 873 aa8.89□□□□□ -0.99
MRE11-209ENST00000540013 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms