RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 POTEIP0CG38 1075 aa18.31■□□□□ 0.52
CCND1-204ENST00000539241 POTEJP0CG39 1038 aa18.31■□□□□ 0.52
CCND1-204ENST00000539241 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
CCND1-204ENST00000539241 IARSP41252 1262 aaKnown RBP18.31■□□□□ 0.52
CCND1-204ENST00000539241 PARP10Q53GL7 1025 aa18.31■□□□□ 0.52
CCND1-204ENST00000539241 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
CCND1-204ENST00000539241 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCND1-204ENST00000539241 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
CCND1-204ENST00000539241 PSMD1Q99460 953 aa18.3■□□□□ 0.52
CCND1-204ENST00000539241 SNED1Q8TER0 1413 aa18.3■□□□□ 0.52
CCND1-204ENST00000539241 ANP32CO43423 234 aa18.29■□□□□ 0.52
CCND1-204ENST00000539241 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
CCND1-204ENST00000539241 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
CCND1-204ENST00000539241 RBM17Q96I25 401 aaKnown RBP18.29■□□□□ 0.52
CCND1-204ENST00000539241 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
CCND1-204ENST00000539241 PCNTO95613 3336 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 FZD9O00144 591 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 C3orf67Q6ZVT6 689 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 LDHDQ86WU2 507 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 CRAMP1Q96RY5 1269 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
CCND1-204ENST00000539241 NUP98P52948 1817 aa18.28■□□□□ 0.52
CCND1-204ENST00000539241 CHL1O00533 1208 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
CCND1-204ENST00000539241 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
CCND1-204ENST00000539241 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 COPS6Q7L5N1 327 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 XAGE3Q8WTP9 111 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 NLRP3Q96P20 1036 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 TRIM35Q9UPQ4 493 aa18.27■□□□□ 0.52
CCND1-204ENST00000539241 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
CCND1-204ENST00000539241 GRIPAP1Q4V328 841 aa18.26■□□□□ 0.51
CCND1-204ENST00000539241 HSP90AB3PQ58FF7 597 aa18.26■□□□□ 0.51
CCND1-204ENST00000539241 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
CCND1-204ENST00000539241 HACL1Q9UJ83 578 aa18.26■□□□□ 0.51
CCND1-204ENST00000539241 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
CCND1-204ENST00000539241 TCERG1O14776 1098 aaKnown RBP18.25■□□□□ 0.51
CCND1-204ENST00000539241 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
CCND1-204ENST00000539241 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
CCND1-204ENST00000539241 SLC51AQ86UW1 340 aa18.25■□□□□ 0.51
CCND1-204ENST00000539241 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCND1-204ENST00000539241 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
CCND1-204ENST00000539241 EPHX2P34913 555 aa18.24■□□□□ 0.51
CCND1-204ENST00000539241 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
CCND1-204ENST00000539241 GPC2Q8N158 579 aa18.24■□□□□ 0.51
CCND1-204ENST00000539241 EIF6P56537 245 aaKnown RBP18.23■□□□□ 0.51
CCND1-204ENST00000539241 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
CCND1-204ENST00000539241 LARGE2Q8N3Y3 721 aa18.23■□□□□ 0.51
CCND1-204ENST00000539241 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
CCND1-204ENST00000539241 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
CCND1-204ENST00000539241 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
CCND1-204ENST00000539241 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
CCND1-204ENST00000539241 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
CCND1-204ENST00000539241 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
CCND1-204ENST00000539241 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
CCND1-204ENST00000539241 ABCC4O15439 1325 aa18.22■□□□□ 0.51
CCND1-204ENST00000539241 HOXB7P09629 217 aa18.21■□□□□ 0.51
CCND1-204ENST00000539241 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 HCLS1P14317 486 aaPredicted RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 PNMA8AQ86V59 439 aaPredicted RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 TRMT112Q9UI30 125 aaKnown RBP18.21■□□□□ 0.51
CCND1-204ENST00000539241 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
CCND1-204ENST00000539241 COL4A5P29400 1685 aa18.21■□□□□ 0.51
CCND1-204ENST00000539241 SCN4AP35499 1836 aa18.21■□□□□ 0.51
CCND1-204ENST00000539241 PPIP5K2O43314 1243 aa18.2■□□□□ 0.5
CCND1-204ENST00000539241 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
CCND1-204ENST00000539241 NIM1KQ8IY84 436 aa18.2■□□□□ 0.5
CCND1-204ENST00000539241 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
CCND1-204ENST00000539241 SH3TC1Q8TE82 1336 aa18.2■□□□□ 0.5
CCND1-204ENST00000539241 ITGBL1O95965 494 aaPredicted RBP18.19■□□□□ 0.5
CCND1-204ENST00000539241 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
CCND1-204ENST00000539241 BBOX1O75936 387 aa18.18■□□□□ 0.5
CCND1-204ENST00000539241 AOC3Q16853 763 aa18.18■□□□□ 0.5
CCND1-204ENST00000539241 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
CCND1-204ENST00000539241 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
CCND1-204ENST00000539241 DBF4Q9UBU7 674 aaPredicted RBP18.18■□□□□ 0.5
CCND1-204ENST00000539241 TMEM88BA6NKF7 163 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 GRAPQ13588 217 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
CCND1-204ENST00000539241 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 CNTROBQ8N137 903 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 SUPT20HQ8NEM7 779 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
CCND1-204ENST00000539241 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 VPS33BQ9H267 617 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
CCND1-204ENST00000539241 SCNN1DP51172 638 aa18.16■□□□□ 0.5
CCND1-204ENST00000539241 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
CCND1-204ENST00000539241 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
CCND1-204ENST00000539241 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
CCND1-204ENST00000539241 RTFDC1Q9BY42 306 aaPredicted RBP18.16■□□□□ 0.5
CCND1-204ENST00000539241 APAF1O14727 1248 aa18.15■□□□□ 0.5
CCND1-204ENST00000539241 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
CCND1-204ENST00000539241 EPS15P42566 896 aa18.15■□□□□ 0.5
CCND1-204ENST00000539241 MPNDQ8N594 471 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms